Script to generate synthea patient data for benchmarking

Author: LZRS

engine/.gitignore

@@ -1 +1,2 @@
 /build
+/synthea

engine/generate_synthea.sh

@@ -0,0 +1,19 @@
+#!/usr/bin/env bash
+
+# Parameters
+POPULATION="${1:-3}"
+SCRIPT_DIR=$(dirname "$0")
+SYNTHEA_DIR="$SCRIPT_DIR"/synthea
+
+if [ ! -d "$SYNTHEA_DIR" ]; then
+  # build synthea according to https://github.com/synthetichealth/synthea
+  git clone https://github.com/synthetichealth/synthea.git "$SYNTHEA_DIR"
+fi
+pushd "$SYNTHEA_DIR" || exit
+# generate valid R4 resources in output/fhir
+./run_synthea -m pregnancy -p "$POPULATION" --exporter.fhir.included_resources Patient --exporter.fhir.transaction_bundle false --exporter.years_of_history 1 --exporter.fhir.use_us_core_ig false --exporter.fhir.bulk_data true
+popd || exit
+
+# Move to benchmark assets dir
+mkdir -p "$SCRIPT_DIR"/benchmark/src/androidTest/assets/bulk_data
+cp "$SYNTHEA_DIR"/output/fhir/Patient*.ndjson "$SCRIPT_DIR"/benchmark/src/androidTest/assets/bulk_data