bstew/pyproject.toml at dev · ghillb/bstew · GitHub

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[project]
name = "bstew"
version = "1.0.0"
description = "BeeSteward v2 Python transpilation - Agent-based pollinator population modeling"
authors = [
    {name = "BSTEW Team"}
]
license = {text = "BSD-3-Clause"}
readme = "README.md"
requires-python = ">=3.11"
dependencies = [
    "mesa",
    "numpy",
    "pandas",
    "scipy",
    "matplotlib",
    "plotly",
    "pyyaml",
    "pillow",
    "tqdm",
    "typer",
    "rich",
    "seaborn>=0.13.2",
    "scikit-learn>=1.6.1",
    "pydantic>=2.11.7",
    "openpyxl>=3.1.5",
    "geopandas>=1.1.1",
    "shapely>=2.1.1",
    "rasterio>=1.4.3",
    "fiona>=1.10.1",
    "dash>=3.1.1",
    "ipywidgets>=8.1.7",
    "dash-bootstrap-components>=2.0.3",
    "reportlab>=4.4.2",
    "psutil>=7.0.0",
    "networkx>=3.5",
    "streamlit>=1.32.0",
]

[project.optional-dependencies]
dev = [
    "pytest",
    "black",
    "ruff",
    "mypy"
]

[project.scripts]
bstew = "bstew.cli:app"

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"

[tool.black]
line-length = 88
target-version = ['py311']

[tool.ruff]
line-length = 88
target-version = "py311"

[tool.mypy]
python_version = "3.11"
warn_return_any = true
warn_unused_configs = true
disallow_untyped_defs = true
show_error_codes = true
warn_unused_ignores = true
exclude = [
    "tests/",
    "docs/",
    "build/",
    "dist/",
]

# Ignore missing imports for libraries without type stubs
[[tool.mypy.overrides]]
module = [
    "plotly.*",
    "sklearn.*",
    "mesa.*",
    "rasterio.*",
    "geopandas.*",
    "dash_bootstrap_components.*",
    "dash.*",
    "xarray.*",
    "SALib.*",
    "fiona.*",
    "ipywidgets.*",
    "pyproj.*",
    "jinja2.*",
    "shapely.*",
    "seaborn.*",
    "reportlab.*",
    "streamlit.*",
]
ignore_missing_imports = true

[tool.pytest.ini_options]
testpaths = ["tests"]
python_files = ["test_*.py"]
python_classes = ["Test*"]
python_functions = ["test_*"]
addopts = [
    "--cov=src/bstew",
    "--cov-report=term-missing",
    "--cov-report=html:artifacts/coverage/html",
    "--cov-report=xml:artifacts/coverage/coverage.xml",
    "--cov-fail-under=80"
]

[tool.coverage.run]
source = ["src/bstew"]
omit = ["tests/*", "src/bstew/cli/netlogo_cli.py"]

[tool.coverage.report]
fail_under = 80
show_missing = true
skip_covered = false
precision = 2

[tool.uv]
dev-dependencies = [
    "black>=25.1.0",
    "mypy>=1.16.1",
    "pandas-stubs>=2.2.2.240807",
    "pre-commit>=4.2.0",
    "pytest-cov>=6.2.1",
    "ruff>=0.12.2",
    "scipy-stubs>=1.15.3.0",
    "types-networkx>=3.5.0.20250712",
    "types-openpyxl>=3.1.5.20250602",
    "types-psutil>=7.0.0.20250601",
    "types-pyyaml>=6.0.12.20250516",
    "types-reportlab>=4.4.1.20250602",
    "types-requests>=2.32.4.20250611",
    "types-seaborn>=0.13.2.20250516",
    "types-shapely>=2.1.0.20250710",
]