diff --git a/.gitignore b/.gitignore index d37cfc06..893e2ac6 100644 --- a/.gitignore +++ b/.gitignore @@ -6,6 +6,13 @@ .DS_Store .idea +# VS Code local settings +.vscode/ + +# act local config & secrets +.actrc +.secrets + # source files src/*.o src/*.so @@ -18,4 +25,5 @@ vignettes/*.html # documentation dir docs/ +# CRAN submission archives CRAN-SUBMISSION diff --git a/DESCRIPTION b/DESCRIPTION index 25161115..e0324dd3 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -66,6 +66,7 @@ Imports: magrittr, GenSA, BayesianTools, + lubridate, multidplyr, stats, utils diff --git a/NAMESPACE b/NAMESPACE index 42bc8501..53650ed4 100644 --- a/NAMESPACE +++ b/NAMESPACE @@ -14,6 +14,7 @@ export(runread_pmodel_f) import(BayesianTools) import(GenSA) import(dplyr) +import(lubridate) importFrom(magrittr,"%>%") importFrom(stats,setNames) useDynLib(rsofun) diff --git a/NEWS.md b/NEWS.md index 530918e1..72814be3 100644 --- a/NEWS.md +++ b/NEWS.md @@ -5,6 +5,10 @@ easier processing within cost-functions. Default cost-functions were updated, but currently ignore the names. This is fully backward compatible, but allows to use the names in user-created cost functions. +* Internally, P-model now computes temperature dependencies of jmax and vcmax + with Kumarathunge et al. (2019) instead of Kattge & Knorr (2007), effectively + using a dampened signal for tc_growth and long-term averages for tc_home. This + alters the simulation results. Formattting of inputs remains unchanged. # rsofun 5.1.0 diff --git a/R/run_biomee_f_bysite.R b/R/run_biomee_f_bysite.R index 952a4158..1ff11a7f 100644 --- a/R/run_biomee_f_bysite.R +++ b/R/run_biomee_f_bysite.R @@ -16,6 +16,8 @@ #' @param luc_forcing An array of land use change (LUC) used during transient phase. #' #' For further specifications of above inputs and examples see \code{\link{biomee_gs_leuning_drivers}}, \code{\link{biomee_p_model_drivers}}, or \code{\link{biomee_p_model_luluc_drivers}}. + +#' @import lubridate #' #' @returns A data.frame with columns containing model output for each land unit (LU). #' See examples \code{\link{biomee_gs_leuning_output}}, \code{\link{biomee_p_model_output}}, or \code{\link{biomee_p_model_luluc_output}}. @@ -231,6 +233,48 @@ run_biomee_f_bysite <- function( makecheck = TRUE ){ ndayyear <- 365 + + # Default value for tc_home + if ("tc_home" %in% names(site_info)) { + stop("Unexpectedly received site_info$tc_home; it should be calculated internally.") + } + + conditionally_add_tmax <- function(df){ + need_to_add_tmax <- !("tmax" %in% colnames(df)) + if (need_to_add_tmax) { + df %>% dplyr::group_by(.data$date) %>% + dplyr::summarise(daily_tmax = max(.data$temp, na.rm = TRUE)) %>% + dplyr::ungroup() + } else { + df %>% dplyr::rename(daily_tmax = "tmax") + } + } + tc_home <- forcing %>% + # conditionally add daily max temp (if needed, e.g. when running "gs_leuning" with hourly forcing) + conditionally_add_tmax() %>% + # add grouping variables: + mutate(month = lubridate::month(.data$date), year = lubridate::year(.data$date)) %>% + # monthly means of daily maximum: + group_by(.data$year, .data$month) %>% + summarise(monthly_avg_daily_tmax = mean(.data$daily_tmax, na.rm = TRUE), .groups = "drop") %>% + # warmest month of each year: + group_by(year) %>% + summarise(t_warmest_month = max(.data$monthly_avg_daily_tmax)) %>% + # mean of yearly warmest months: + ungroup() %>% + summarise(tc_home = mean(.data$t_warmest_month, na.rm = TRUE)) %>% + # extract scalar value + dplyr::pull(.data$tc_home) + + site_info$tc_home <- tc_home # TODO: rather in site_info or in params_tile? + # params_tile$tc_home <- tc_home # TODO: rather in site_info or in params_tile? + + # Validate calculation + if (is.na(site_info$tc_home) || length(site_info$tc_home) == 0) { + warning("Calculated tc_home is NA or missing; defaulting to 25C.") + site_info$tc_home <- 25 + } + # record number of years in forcing data # frame to use as default values (unless provided othrwise as params_siml$nyeartrend) forcing_years <- nrow(forcing)/(ndayyear * params_siml$steps_per_day) @@ -548,7 +592,8 @@ prepare_site_info <- function(site_info){ site_info <- site_info %>% select( "lon", "lat", - "elv" + "elv", + "tc_home" ) return(site_info) } diff --git a/R/run_pmodel_f_bysite.R b/R/run_pmodel_f_bysite.R index 4bfe7de0..699f10bf 100644 --- a/R/run_pmodel_f_bysite.R +++ b/R/run_pmodel_f_bysite.R @@ -15,6 +15,7 @@ #' For further specifications of above inputs and examples see \code{\link{p_model_drivers}} or \code{\link{p_model_drivers_vcmax25}} #' @import dplyr +#' @import lubridate #' #' @returns Model output is provided as a tidy dataframe, with columns: #' \describe{ @@ -159,7 +160,46 @@ run_pmodel_f_bysite <- function( secs_per_tstep <- difftime(times[1], times[2], units = "secs") %>% as.integer() %>% abs() - + + # Default value for tc_home + if ("tc_home" %in% names(site_info)) { + stop("Unexpectedly received site_info$tc_home; it should be calculated internally.") + } + + conditionally_add_tmax <- function(df){ + need_to_add_tmax <- !("tmax" %in% colnames(df)) + if (need_to_add_tmax) { + df %>% dplyr::group_by(.data$date) %>% + dplyr::summarise(daily_tmax = max(.data$temp, na.rm = TRUE)) %>% + dplyr::ungroup() + } else { + df %>% dplyr::rename(daily_tmax = "tmax") + } + } + tc_home <- forcing %>% + # conditionally add daily max temp (if needed, e.g. when running "gs_leuning" with hourly forcing) + conditionally_add_tmax() %>% + # add grouping variables: + mutate(month = lubridate::month(.data$date), year = lubridate::year(.data$date)) %>% + # monthly means of daily maximum: + group_by(.data$year, .data$month) %>% + summarise(monthly_avg_daily_tmax = mean(.data$daily_tmax, na.rm = TRUE), .groups = "drop") %>% + # warmest month of each year: + group_by(year) %>% + summarise(t_warmest_month = max(.data$monthly_avg_daily_tmax)) %>% + # mean of yearly warmest months: + ungroup() %>% + summarise(tc_home = mean(.data$t_warmest_month, na.rm = TRUE)) %>% + # extract scalar value + dplyr::pull(.data$tc_home) + + site_info$tc_home <- tc_home + # Validate calculation + if (is.na(site_info$tc_home) || length(site_info$tc_home) == 0) { + warning("Calculated tc_home is NA or missing; defaulting to 25C.") + site_info$tc_home <- 25 + } + # re-define units and naming of forcing dataframe # keep the order of columns - it's critical for Fortran (reading by column number) forcing_features <- c( @@ -307,6 +347,7 @@ run_pmodel_f_bysite <- function( latitude = as.numeric(site_info$lat), altitude = as.numeric(site_info$elv), whc = as.numeric(site_info$whc), + tc_home = as.numeric(site_info$tc_home), n = as.integer(nrow(forcing)), # number of rows in matrix (pre-allocation of memory) par = c(as.numeric(params_modl$kphio), # model parameters as vector in order as.numeric(params_modl$kphio_par_a), diff --git a/data/biomee_gs_leuning_output.rda b/data/biomee_gs_leuning_output.rda index ef3fc7e4..a0f6e14f 100644 Binary files a/data/biomee_gs_leuning_output.rda and b/data/biomee_gs_leuning_output.rda differ diff --git a/data/biomee_p_model_luluc_output.rda b/data/biomee_p_model_luluc_output.rda index 3e9f105c..372d3733 100644 Binary files a/data/biomee_p_model_luluc_output.rda and b/data/biomee_p_model_luluc_output.rda differ diff --git a/data/biomee_p_model_output.rda b/data/biomee_p_model_output.rda index aa195747..6daccb81 100644 Binary files a/data/biomee_p_model_output.rda and b/data/biomee_p_model_output.rda differ diff --git a/data/p_model_output.rda b/data/p_model_output.rda index b01346cb..a49adee7 100644 Binary files a/data/p_model_output.rda and b/data/p_model_output.rda differ diff --git a/data/p_model_output_vcmax25.rda b/data/p_model_output_vcmax25.rda index b38d7bbd..f93ac4fb 100644 Binary files a/data/p_model_output_vcmax25.rda and b/data/p_model_output_vcmax25.rda differ diff --git a/src/biosphere_pmodel.mod.f90 b/src/biosphere_pmodel.mod.f90 index 48c0c295..1d6e1cd6 100644 --- a/src/biosphere_pmodel.mod.f90 +++ b/src/biosphere_pmodel.mod.f90 @@ -136,7 +136,8 @@ function biosphere_annual() result( out_biosphere ) myinterface%climate(doy), & myinterface%grid, & init_daily, & - myinterface%params_siml%in_ppfd & + myinterface%params_siml%in_ppfd, & + myinterface%tc_home & ) ! if (verbose) print*,'... done' diff --git a/src/gpp_biomee.mod.f90 b/src/gpp_biomee.mod.f90 index 709c4a1e..97901416 100644 --- a/src/gpp_biomee.mod.f90 +++ b/src/gpp_biomee.mod.f90 @@ -68,7 +68,7 @@ subroutine gpp( forcing, vegn ) integer :: i real :: rad_top ! downward radiation at the top of the canopy, W/m2 real :: rad_net ! net radiation absorbed by the canopy, W/m2 - real :: TairC, TairK ! air temperature, degC and degK + real :: TairC, TairK ! air temperature, deg C and deg K real :: cana_q ! specific humidity in canopy air space, kg/kg real :: cana_co2 ! co2 concentration in canopy air space, mol CO2/mol dry air real :: p_surf ! surface pressure, Pa @@ -149,7 +149,7 @@ subroutine gpp( forcing, vegn ) rad_net = f_light(cc%layer) * forcing%radiation * 0.9 ! net radiation absorbed by the canopy, W/m2 p_surf = forcing%P_air ! Pa TairK = forcing%TairK ! K - TairC = forcing%TairC ! degC + TairC = forcing%TairC ! deg C cana_q = (calc_esat(TairC) * forcing%RH * h2o_molmass) / (p_surf * kMa) ! air specific humidity, kg/kg cana_co2 = forcing%CO2 ! co2 concentration in canopy air space, mol CO2/mol dry air @@ -240,6 +240,7 @@ subroutine gpp( forcing, vegn ) tc = vegn%dampended_forcing%temp, & vpd = vegn%dampended_forcing%vpd, & patm = vegn%dampended_forcing%patm, & + tc_home = inputs%site_info%tc_home, & c4 = .false., & method_optci = "prentice14", & method_jmaxlim = "wang17" & @@ -270,7 +271,7 @@ subroutine gs_leuning( rad_top, rad_net, tl, ea, lai, & real, intent(in) :: rad_top ! PAR dn on top of the canopy, w/m2 real, intent(in) :: rad_net ! PAR net on top of the canopy, w/m2 - real, intent(in) :: tl ! leaf temperature, degK + real, intent(in) :: tl ! leaf temperature, K real, intent(in) :: ea ! specific humidity in the canopy air, kg/kg real, intent(in) :: lai ! leaf area index !real, intent(in) :: leaf_age ! age of leaf since budburst (deciduos), days @@ -519,14 +520,14 @@ function qscomp(T, p) result(qsat) !--------Output real :: qsat ! Output type: saturated specific humidity, kg/kg !--------Inputs - real :: T ! temperature, degK + real :: T ! temperature, K real :: p ! pressure, Pa !--------local var real :: myesat ! sat. water vapor pressure - real :: Temp ! degC + real :: Temp ! deg C ! calculate saturated specific humidity - Temp = T - 273.16 ! degC + Temp = T - 273.16 ! deg C myesat=MIN(610.78*exp(17.27*Temp/(Temp+237.3)), p) ! Pa qsat = 0.622*myesat /(p - 0.378*myesat ) diff --git a/src/gpp_pmodel.mod.f90 b/src/gpp_pmodel.mod.f90 index d8ca469c..1b45fbed 100644 --- a/src/gpp_pmodel.mod.f90 +++ b/src/gpp_pmodel.mod.f90 @@ -44,7 +44,7 @@ module md_gpp_pmodel contains - subroutine gpp( tile, tile_fluxes, co2, climate, grid, init, in_ppfd) + subroutine gpp( tile, tile_fluxes, co2, climate, grid, init, in_ppfd, tc_home) !////////////////////////////////////////////////////////////////// ! Wrapper function to call to P-model. ! Calculates meteorological conditions with memory based on daily @@ -63,7 +63,7 @@ subroutine gpp( tile, tile_fluxes, co2, climate, grid, init, in_ppfd) type(gridtype) :: grid logical, intent(in) :: init ! is true on the very first simulation day (first subroutine call of each gridcell) logical, intent(in) :: in_ppfd ! whether to use PPFD from forcing or from SPLASH output - + real, intent(in) :: tc_home ! long-term mean max temp of the warmest month (deg C) ! local variables type(outtype_pmodel) :: out_pmodel ! list of P-model output variables type(climate_type) :: climate_acclimation ! list of climate variables to which P-model calculates acclimated traits @@ -151,6 +151,7 @@ subroutine gpp( tile, tile_fluxes, co2, climate, grid, init, in_ppfd) tc = temp_memory, & vpd = vpd_memory, & patm = patm_memory, & + tc_home = tc_home, & c4 = params_pft_plant(pft)%c4, & method_optci = "prentice14", & method_jmaxlim = "wang17" & @@ -209,8 +210,17 @@ subroutine gpp( tile, tile_fluxes, co2, climate, grid, init, in_ppfd) tile_fluxes(lu)%plant(pft)%iwue = out_pmodel%iwue ! quantities with instantaneous temperature response - tile_fluxes(lu)%plant(pft)%vcmax = calc_ftemp_inst_vcmax( climate%dtemp, climate%dtemp, tcref = 25.0 ) * out_pmodel%vcmax25 - tile_fluxes(lu)%plant(pft)%jmax = calc_ftemp_inst_jmax( climate%dtemp, climate%dtemp, tcref = 25.0 ) * out_pmodel%jmax25 + tile_fluxes(lu)%plant(pft)%vcmax = calc_ftemp_inst_vcmax( & + tc_leaf = climate%dtemp, & + tc_growth = temp_memory, & + ! no tc_home needed for calc_ftemp_inst_vcmax + tc_ref = 25.0 ) * out_pmodel%vcmax25 + + tile_fluxes(lu)%plant(pft)%jmax = calc_ftemp_inst_jmax( & + tc_leaf = climate%dtemp, & + tc_growth = temp_memory, & + tc_home = tc_home, & + tc_ref = 25.0 ) * out_pmodel%jmax25 !---------------------------------------------------------------- ! Stomatal conductance diff --git a/src/interface_biosphere_pmodel.mod.f90 b/src/interface_biosphere_pmodel.mod.f90 index 8fdcb050..f41ddaaf 100644 --- a/src/interface_biosphere_pmodel.mod.f90 +++ b/src/interface_biosphere_pmodel.mod.f90 @@ -34,6 +34,7 @@ module md_interface_pmodel real :: pco2 type(gridtype) :: grid real :: whc_prescr + real :: tc_home type(climate_type), dimension(ndayyear) :: climate type(vegcover_type), dimension(ndayyear):: vegcover type(outtype_steering) :: steering_state diff --git a/src/interface_in_biosphere_biomee.mod.f90 b/src/interface_in_biosphere_biomee.mod.f90 index b9e100e6..ddaad9f8 100644 --- a/src/interface_in_biosphere_biomee.mod.f90 +++ b/src/interface_in_biosphere_biomee.mod.f90 @@ -20,7 +20,7 @@ module md_interface_in_biomee !===== Number of parameters integer, public, parameter :: nvars_params_siml = 11 - integer, public, parameter :: nvars_site_info = 3 + integer, public, parameter :: nvars_site_info = 4 integer, public, parameter :: nvars_params_tile = 19 integer, public, parameter :: nvars_init_soil = 4 integer, public, parameter :: nvars_init_cohorts = 9 @@ -203,6 +203,7 @@ module md_interface_in_biomee real :: lon real :: lat real :: elv ! elevation + real :: tc_home contains @@ -407,9 +408,10 @@ subroutine populate_site_info(self, site_info) real(kind=c_double), dimension(nvars_site_info), intent(in) :: site_info ! Site info - self%lon = real( site_info(1) ) - self%lat = real( site_info(2) ) - self%elv = real( site_info(3) ) + self%lon = real( site_info(1) ) + self%lat = real( site_info(2) ) + self%elv = real( site_info(3) ) + self%tc_home = real( site_info(4) ) end subroutine populate_site_info subroutine populate_spec_data(self, params_species) diff --git a/src/photosynth_pmodel.mod.f90 b/src/photosynth_pmodel.mod.f90 index c2a5c242..ad6acfd5 100644 --- a/src/photosynth_pmodel.mod.f90 +++ b/src/photosynth_pmodel.mod.f90 @@ -70,7 +70,7 @@ module md_photosynth contains - function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optci, method_jmaxlim ) result( out_pmodel ) + function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, tc_home, c4, method_optci, method_jmaxlim ) result( out_pmodel ) !////////////////////////////////////////////////////////////////// ! Implements the P-model, providing predictions for ci, Vcmax, and ! light use efficiency, etc. @@ -87,6 +87,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc real, intent(in) :: tc ! air temperature (deg C), relevant for acclimated response real, intent(in) :: vpd ! vapor pressure (Pa), relevant for acclimated response real, intent(in) :: patm ! atmospheric pressure (Pa), relevant for acclimated response + real, intent(in) :: tc_home ! long-term mean max temp of the warmest month (deg C) logical, intent(in) :: c4 ! whether or not C4 photosynthesis pathway is followed. If .false., it's C3. character(len=*), intent(in) :: method_optci ! Method used for deriving optimal ci:ca character(len=*), intent(in) :: method_jmaxlim ! Method used for accounting for Jmax limitation @@ -132,7 +133,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc real :: fact_jmaxlim ! Jmax limitation factor (unitless) ! local variables for Jmax limitation following Nick Smith's method - real :: omega, omega_star, tcref, jmax_over_vcmax, jmax_prime + real :: omega, omega_star, tc_ref, jmax_over_vcmax, jmax_prime real, parameter :: theta = 0.85 ! used only for smith19 setup real, parameter :: c_cost = 0.05336251 ! used only for smith19 setup @@ -163,7 +164,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc ! XXX PMODEL_TEST: ok ! print*,'kmm: ', kmm - ! viscosity correction factor = viscosity( temp, press )/viscosity( 25 degC, 1013.25 Pa) + ! viscosity correction factor = viscosity( temp, press )/viscosity( 25 deg C, 1013.25 Pa) ns = calc_viscosity_h2o( tc, patm ) ! Pa s ns25 = calc_viscosity_h2o( 25.0, kPo ) ! Pa s ns_star = ns / ns25 ! (unitless) @@ -262,15 +263,15 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc omega = calc_omega( theta = theta, c_cost = c_cost, m = out_optchi%mj ) ! Eq. S4 omega_star = 1.0 + omega - sqrt( (1.0 + omega)**2 - (4.0 * theta * omega) ) ! Eq. 18 - ! calculate Vcmax-star, which corresponds to Vcmax at a reference temperature 'tcref' + ! calculate Vcmax-star, which corresponds to Vcmax at a reference temperature 'tc_ref' vcmax_star = kphio * ppfd * out_optchi%mjoc * omega_star / (8.0 * theta) ! Eq. 19 - ! tcref is the optimum temperature in K, assumed to be the temperature at which Vcmax* is operating. - ! tcref is estimated based on its relationship to growth temperature following Kattge & Knorr 2007 - tcref = 0.44 * tc + 24.92 + ! tc_ref is the optimum temperature in K, assumed to be the temperature at which Vcmax* is operating. + ! tc_ref is estimated based on its relationship to growth temperature following Kattge & Knorr 2007 + tc_ref = 0.44 * tc + 24.92 ! calculated acclimated Vcmax at prevailing growth temperatures - ftemp_inst_vcmax = calc_ftemp_inst_vcmax( tc, tc, tcref = tcref ) + ftemp_inst_vcmax = calc_ftemp_inst_vcmax( tc, tc, tc_ref = tc_ref ) vcmax = vcmax_star * ftemp_inst_vcmax ! Eq. 20 ! calculate Jmax @@ -278,8 +279,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc jmax_prime = jmax_over_vcmax * vcmax ! light use efficiency - lue = c_molmass * kphio * out_optchi%mj * omega_star / (8.0 * theta) ! * calc_ftemp_inst_vcmax( tc, tc, tcref = tcref ) ! treat theta as a calibratable parameter - + lue = c_molmass * kphio * out_optchi%mj * omega_star / (8.0 * theta) ! treat theta as a calibratable parameter else if (method_jmaxlim=="none") then @@ -307,7 +307,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc ! Corrolary preditions (This is prelimirary!) !----------------------------------------------------------------------- ! Vcmax25 (vcmax normalized to 25 deg C) - ftemp_inst_vcmax = calc_ftemp_inst_vcmax( tc, tc, tcref = 25.0 ) + ftemp_inst_vcmax = calc_ftemp_inst_vcmax( tc, tc, tc_ref = 25.0 ) vcmax25 = vcmax / ftemp_inst_vcmax ! ! Dark respiration at growth temperature @@ -332,7 +332,7 @@ function pmodel( kphio, beta, kc_jmax, ppfd, co2, tc, vpd, patm, c4, method_optc ! (-) * (-) * (mol m-2 s-1) / (-) end if ! for normalization using temperature response from Duursma et al., 2015, implemented in plantecophys R package - ftemp_inst_jmax = calc_ftemp_inst_jmax( tc, tc, tcref = 25.0 ) + ftemp_inst_jmax = calc_ftemp_inst_jmax(tc, tc, tc_home, tc_ref = 25.0 ) jmax25 = jmax / ftemp_inst_jmax end if @@ -896,107 +896,97 @@ function calc_ftemp_inst_rd( tc ) result( fr ) end function calc_ftemp_inst_rd - function calc_ftemp_inst_vcmax( tcleaf, tcgrowth, tcref ) result( fv ) + function calc_ftemp_inst_vcmax( tc_leaf, tc_growth, tc_ref ) result( fv ) !----------------------------------------------------------------------- - ! arguments - ! tcleaf: temperature (degrees C) - ! tref: is 'to' in Nick's set it to 25 C (=298.15 K in other cals) - ! - ! function return variable - ! fv: temperature response factor, relative to 25 deg C. + ! Calculates the instantaneous temperature response factor for Vcmax. ! - ! Output: Factor fv to correct for instantaneous temperature response - ! of Vcmax for: + ! Arguments: + ! tc_leaf: Instantaneous leaf temperature (°C) + ! tc_growth: Growth temperature, 30-day mean damped temperature (°C) + ! tc_home: Long-term mean maximum temperature of the warmest month (°C) + ! tc_ref: Reference temperature (°C), is 'to' in Nick's set it to 25 °C (=298.15 K in other cals) ! - ! Vcmax(temp) = fv * Vcmax(25 deg C) - ! - ! Ref: Wang Han et al. (in prep.) - !----------------------------------------------------------------------- - ! arguments - real, intent(in) :: tcleaf - real, intent(in) :: tcgrowth - real, intent(in), optional :: tcref - - ! function return variable - real :: fv - - ! loal parameters - real, parameter :: Ha = 71513 ! activation energy (J/mol) - real, parameter :: Hd = 200000 ! deactivation energy (J/mol) - real, parameter :: a_ent = 668.39 ! offset of entropy vs. temperature relationship from Kattge & Knorr (2007) (J/mol/K) - real, parameter :: b_ent = 1.07 ! slope of entropy vs. temperature relationship from Kattge & Knorr (2007) (J/mol/K^2) + ! Returns: + ! fv: Instantaneous temperature response factor (unitless) - ! local variables - real :: tkref, tkleaf, dent, fva, fvb, mytcref + ! Reference: + ! Kumarathunge et al. (2019), Eq. 7 + !----------------------------------------------------------------------- - if (present(tcref)) then - mytcref = tcref - else - mytcref = 298.15 - end if + ! Function arguments + real, intent(in) :: tc_leaf + real, intent(in) :: tc_growth + real, intent(in) :: tc_ref - tkref = mytcref + 273.15 ! to Kelvin + ! Local variables + real :: tk_ref, tk_leaf, dent, fva, fvb + real :: Ha, Hd - ! conversion of temperature to Kelvin, tcleaf is the instantaneous leaf temperature in degrees C. - tkleaf = tcleaf + 273.15 + ! Output variable + real :: fv - ! calculate entropy following Kattge & Knorr (2007), negative slope and y-axis intersect is when expressed as a function of temperature in degrees Celsius, not Kelvin !!! - dent = a_ent - b_ent * tcgrowth ! 'tcgrowth' corresponds to 'tmean' in Nicks, 'tc25' is 'to' in Nick's - fva = calc_ftemp_arrhenius( tkleaf, Ha, tkref ) - fvb = (1.0 + exp( (tkref * dent - Hd)/(kR * tkref) ) ) / (1.0 + exp( (tkleaf * dent - Hd)/(kR * tkleaf) ) ) + ! Constants (defined here or globally) + Ha = (42.6 + 1.14 * tc_growth) * 1.0e3 ! activation energy (J/mol) + Hd = 200000.0 ! deactivation energy (J/mol) + ! kR ! kR is universal gas constant (J/mol/K) + + tk_ref = tc_ref + 273.15 ! to Kelvin + tk_leaf = tc_leaf + 273.15 ! to Kelvin + + ! Calculate Ha ("Ea") and dent ("Delta S") based on Kumarathunge et al. (2019) for Vcmax + dent = 645.13 - 0.38 * tc_growth ! J/mol/K + fva = calc_ftemp_arrhenius( tk_leaf, Ha, tk_ref ) + fvb = (1.0 + exp( (tk_ref * dent - Hd)/(kR * tk_ref) )) / (1.0 + exp( (tk_leaf * dent - Hd)/(kR * tk_leaf) )) fv = fva * fvb end function calc_ftemp_inst_vcmax - function calc_ftemp_inst_jmax( tcleaf, tcgrowth, tcref ) result( fv ) + function calc_ftemp_inst_jmax( tc_leaf, tc_growth, tc_home, tc_ref ) result( fv ) !----------------------------------------------------------------------- - ! Calculates the instantaneous temperature response of Jmax + ! Calculates the instantaneous temperature response factor for Jmax. ! - ! Given Jmax at a reference temperature (argument tcref) - ! this function calculates its temperature-scaling factor following modified Arrhenius - ! kinetics based on Kattge & Knorr (2007). + ! Arguments: + ! tc_leaf: Instantaneous leaf temperature (°C) + ! tc_growth: Growth temperature, 30-day mean damped temperature (°C) + ! tc_home: Long-term mean maximum temperature of the warmest month (°C) + ! tc_ref: Reference temperature (°C), is 'to' in Nick's set it to 25 °C (=298.15 K in other cals) ! - ! Reference: - ! Kattge, J. and Knorr, W.: Temperature acclimation in a biochemical model of - ! photosynthesis: a reanalysis of data from 36 species, Plant, Cell and Environment, - ! 30,1176–1190, 2007. + ! Returns: + ! fv: Instantaneous temperature response factor (unitless) + + ! Reference: + ! Kumarathunge et al. (2019), Eq. 7 !----------------------------------------------------------------------- - ! arguments - real, intent(in) :: tcleaf - real, intent(in) :: tcgrowth - real, intent(in), optional :: tcref - - ! function return variable - real :: fv - ! loal parameters - real, parameter :: Ha = 49884 ! activation energy (J/mol) - real, parameter :: Hd = 200000 ! deactivation energy (J/mol) - real, parameter :: a_ent = 659.70 ! offset of entropy vs. temperature relationship from Kattge & Knorr (2007) (J/mol/K) - real, parameter :: b_ent = 0.75 ! slope of entropy vs. temperature relationship from Kattge & Knorr (2007) (J/mol/K^2) - - ! local variables - real :: tkref, tkleaf, dent, fva, fvb, mytcref + ! Function arguments + real, intent(in) :: tc_leaf + real, intent(in) :: tc_growth + real, intent(in) :: tc_home + real, intent(in) :: tc_ref - if (present(tcref)) then - mytcref = tcref - else - mytcref = 298.15 - end if + ! Local variables + real :: tk_ref, tk_leaf, dent, fva, fvb + real :: Hd, Ha - tkref = mytcref + 273.15 ! to Kelvin + ! Output variable + real :: fv - ! conversion of temperature to Kelvin, tcleaf is the instantaneous leaf temperature in degrees C. - tkleaf = tcleaf + 273.15 + ! Constants (defined here or globally) + Ha = 40710.0 ! J/mol (constant activation energy for Jmax) + Hd = 200000.0 ! deactivation energy (J/mol) + ! kR ! kR is universal gas constant (J/mol/K) + + tk_ref = tc_ref + 273.15 ! to Kelvin + tk_leaf = tc_leaf + 273.15 ! to Kelvin - ! calculate entropy following Kattge & Knorr (2007), negative slope and y-axis intersect is when expressed as a function of temperature in degrees Celsius, not Kelvin !!! - dent = a_ent - b_ent * tcgrowth ! 'tcgrowth' corresponds to 'tmean' in Nicks, 'tc25' is 'to' in Nick's - fva = calc_ftemp_arrhenius( tkleaf, Ha, tkref ) - fvb = (1.0 + exp( (tkref * dent - Hd)/(kR * tkref) ) ) / (1.0 + exp( (tkleaf * dent - Hd)/(kR * tkleaf) ) ) + ! Calculate Ha ("Ea") and dent ("Delta S") based on Kumarathunge et al. (2019) for Jmax + dent = 658.77 - 0.84 * tc_home - 0.52 * (tc_growth - tc_home) ! J/mol/K + fva = calc_ftemp_arrhenius( tk_leaf, Ha, tk_ref ) + fvb = (1.0 + exp( (tk_ref * dent - Hd)/(kR * tk_ref) )) / (1.0 + exp( (tk_leaf * dent - Hd)/(kR * tk_leaf) )) fv = fva * fvb - end function calc_ftemp_inst_jmax + end function calc_ftemp_inst_jmax function calc_ftemp_arrhenius( tk, dha, tkref ) result( ftemp ) @@ -1019,6 +1009,9 @@ function calc_ftemp_arrhenius( tk, dha, tkref ) result( ftemp ) ! function return variable real :: ftemp + ! Constants (defined here or globally) + ! kR ! kR is universal gas constant (J/mol/K) + if (present(tkref)) then mytkref = tkref else diff --git a/src/pmodel.mod.f90 b/src/pmodel.mod.f90 index 543f2d74..643d5b76 100644 --- a/src/pmodel.mod.f90 +++ b/src/pmodel.mod.f90 @@ -36,6 +36,7 @@ subroutine pmodel_onestep_f( & ! local variables real :: kphio, kphio_par_a, kphio_par_b, beta_unitcostratio, rd_to_vcmax, kc_jmax, & temp, vpd, ppfd, co2, patm, kphio_temp, vcmax, jmax, rd + real :: tc_home logical :: c4 type(outtype_pmodel) :: out_pmodel ! list of P-model output variables @@ -60,7 +61,9 @@ subroutine pmodel_onestep_f( & ppfd = real(forcing(1,3)) ! (mol m-2 s-1) (while netrad is W m-2) co2 = real(forcing(1,4)) ! (ppm) patm = real(forcing(1,5)) ! (Pa) - + + tc_home = temp ! Long-term mean maximum temperature of the warmest month (deg C) + !---------------------------------------------------------------- ! Low-temperature effect on quantum yield efficiency !---------------------------------------------------------------- @@ -94,14 +97,15 @@ subroutine pmodel_onestep_f( & tc = temp, & vpd = vpd, & patm = patm, & + tc_home = tc_home, & c4 = c4, & method_optci = "prentice14", & method_jmaxlim = "wang17" & ) ! quantities with instantaneous temperature response - vcmax = calc_ftemp_inst_vcmax( temp, temp, tcref = 25.0 ) * out_pmodel%vcmax25 - jmax = calc_ftemp_inst_jmax( temp, temp, tcref = 25.0 ) * out_pmodel%jmax25 + vcmax = calc_ftemp_inst_vcmax( temp, temp, tc_ref = 25.0 ) * out_pmodel%vcmax25 + jmax = calc_ftemp_inst_jmax( temp, temp, tc_home, tc_ref = 25.0 ) * out_pmodel%jmax25 rd = out_pmodel%vcmax25 * rd_to_vcmax * calc_ftemp_inst_rd( temp ) * c_molmass !---------------------------------------------------------------- @@ -139,6 +143,7 @@ subroutine pmodel_f( & latitude, & altitude, & whc, & + tc_home, & nt, & par, & forcing, & @@ -178,6 +183,7 @@ subroutine pmodel_f( & real(kind=c_double), intent(in) :: latitude real(kind=c_double), intent(in) :: altitude real(kind=c_double), intent(in) :: whc + real(kind=c_double), intent(in) :: tc_home integer(kind=c_int), intent(in) :: nt ! number of time steps real(kind=c_double), dimension(9), intent(in) :: par ! free (calibratable) model parameters real(kind=c_double), dimension(nt,12), intent(in) :: forcing ! array containing all temporally varying forcing data (rows: time steps; columns: 1=air temperature, 2=rainfall, 3=vpd, 4=ppfd, 5=net radiation, 6=sunshine fraction, 7=snowfall, 8=co2, 9=fapar, 10=patm, 11=tmin, 12=tmax) @@ -228,6 +234,11 @@ subroutine pmodel_f( & !---------------------------------------------------------------- myinterface%whc_prescr = real( whc ) + !---------------------------------------------------------------- + ! GET Home TEMPERATURE (tc_home) + !---------------------------------------------------------------- + myinterface%tc_home = real( tc_home ) + !---------------------------------------------------------------- ! GET CALIBRATABLE MODEL PARAMETERS (so far a small list) !---------------------------------------------------------------- diff --git a/src/sofunutils.mod.f90 b/src/sofunutils.mod.f90 index 94d2ded8..d77e005e 100644 --- a/src/sofunutils.mod.f90 +++ b/src/sofunutils.mod.f90 @@ -144,7 +144,7 @@ end function calc_patm pure function calc_esat(T) result( out_esat ) ! pressure, Pa implicit none real :: out_esat - real, intent(in) :: T ! degC + real, intent(in) :: T ! deg C out_esat=610.78*exp(17.27*T/(T+237.3)) diff --git a/src/vegetation_processes_biomee.mod.f90 b/src/vegetation_processes_biomee.mod.f90 index 79b3f602..fb7131f3 100755 --- a/src/vegetation_processes_biomee.mod.f90 +++ b/src/vegetation_processes_biomee.mod.f90 @@ -81,7 +81,7 @@ subroutine plant_respiration( cc, tairK ) ! Adopted from BiomeE-Allcation. !---------------------------------------------------------------------- type(cohort_type), intent(inout) :: cc - real, intent(in) :: tairK ! degK + real, intent(in) :: tairK ! K real :: tf, tfs ! thermal inhibition factors for above- and below-ground biomass real :: r_stem, r_root real :: Acambium ! cambium area, m2/tree diff --git a/src/wrappersc.c b/src/wrappersc.c index ea2fdd2c..1b45dcad 100644 --- a/src/wrappersc.c +++ b/src/wrappersc.c @@ -32,6 +32,7 @@ void F77_NAME(pmodel_f)( double *latitude, double *altitude, double *whc, + double *tc_home, int *nt, double *par, double *forcing, @@ -60,6 +61,7 @@ extern SEXP pmodel_f_C( SEXP latitude, SEXP altitude, SEXP whc, + SEXP tc_home, SEXP n, SEXP par, SEXP forcing @@ -94,6 +96,7 @@ extern SEXP pmodel_f_C( REAL(latitude), REAL(altitude), REAL(whc), + REAL(tc_home), INTEGER(n), REAL(par), REAL(forcing), @@ -269,7 +272,7 @@ extern SEXP biomee_f_C( // Declarations for all functions ///////////////////////////////////////////////////////////// static const R_CallMethodDef CallEntries[] = { - {"pmodel_f_C", (DL_FUNC) &pmodel_f_C, 23}, // Specify number of arguments to C wrapper as the last number here + {"pmodel_f_C", (DL_FUNC) &pmodel_f_C, 24}, // Specify number of arguments to C wrapper as the last number here {"pmodel_onestep_f_C", (DL_FUNC) &pmodel_onestep_f_C, 3}, // Specify number of arguments to C wrapper as the last number here {"biomee_f_C", (DL_FUNC) &biomee_f_C, 12}, // Number of arguments of the C wrapper function for biomee (the SEXP variables, not the output) { NULL, NULL, 0 } diff --git a/tests/testthat/_snaps/model-runs-snapshot-biomee.md b/tests/testthat/_snaps/model-runs-snapshot-biomee.md index d60e35ff..cf701a4a 100644 --- a/tests/testthat/_snaps/model-runs-snapshot-biomee.md +++ b/tests/testthat/_snaps/model-runs-snapshot-biomee.md @@ -14,54 +14,53 @@ # `mod_BiomeE_Pmodel_odt_yr251`: tibble::tribble( - ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, - 251, 1, 273.5336608886719, 1.436545491218567, 799.9600830078125, 0, 0.03994165733456611633, 1.3665517568588257, 19.960058212280273, 179.99998474121094, 600, 3.492227792739868, 0.0022163810208439827, 0.0022776268888264894, 6.124589708633721e-05, 0.00146035687066614628, 2.143047571182251, 0.0019968082197010517, 0.5936786532402039, 0.36092817783355713, 4.567693710327148, 3.351698875427246, 0.06145501136779785, 9.9840384791605175e-05, 0.0102148223668336868, 0.009023189544677734, 0.01305055245757103, 0.0095762824639678, 0.16301999986171722, 2.195016622543335, 72.76547241210938, 0.016302000731229782, 0x1.d20c5p-4, 0.6753336787223816, 0.0022190751042217016, 0.00014529678446706384, - 251, 2, 271.50848388671875, 2.0038182735443115, 799.958984375, 0, 0.041029613465070724487, 0x1.f6c0a8p+0, 19.95897102355957, 179.99998474121094, 600, 3.498727321624756, -0.00012322585098445415, 0.0022454638965427876, 0.0023686897475272417, 0.00145139975938946, 2.13828444480896, 0.00217894883826375, 0.59478360414505, 0.3608582615852356, 4.553348541259766, 3.3679449558258057, 0.06138777360320091, 0.00010894741717493162, 0.010233834385871887, 0.0090214414522051811, 0.013009566813707352, 0.009622699581086636, 0.16302262246608734, 2.1955597400665283, 72.76499938964844, 0.016302261501550674, 0.1137925386428833, 0.6753363013267517, 0.00225251168012619, 0, - 251, 180, 290.3451843261719, 2.415818214416504, 799.5160522460938, 0, 0.4839525520801544, 0x1.be2cb8p+0, 19.516048431396484, 179.99998474121094, 600, 3.61742639541625977, 0.006934003438800573, 0.0093658901751041412, 0.002431886736303568, 0.0057413917966187, 2.1303770542144775, 0.03290090337395668, 0.6149625778198242, 0.36590710282325745, 4.699373722076416, 3.5189948081970215, 0.06294948607683182, 0.00164504500571638346, 0.010581032373011112, 0.009147659875452518, 0.01342678256332874298, 0.010054271668195724, 0.16411568224430084, 2.2025346755981445, 72.58417510986328, 0.016411568969488144, 0x1.d047e6p-4, 0.6756302714347839, 0.0012345561990514398, 0.00043321942212060094, - 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.04862569645047188, 1.9935002326965332, 19.95137596130371, 179.99998474121094, 600, 0x1.df1c46p+1, 0.000492400024086237, 0.0024669859558343887, 0.00197458593174815178, 0.0014152369694784284, 2.230586528778076, 0.0699843242764473, 0.636318564414978, 0.3799169957637787, 4.901171684265137, 3.666433334350586, 0.06397349387407303, 0.0034992159344255924, 0.010948486626148224, 0.0094979070127010345, 0.0140033476054668427, 0.0104755237698555, 0.16300229728221893, 2.03177762031555176, 72.16447448730469, 0.016300229355692863, 0.10710261017084122, 0.6754700541496277, 0.0022499526385217905, 7.749247015453875e-05, - 251, 365, 273.3876037597656, 1.826090812683105469, 799.9300537109375, 0, 0.06998022645711899, 1.7774653434753418, 19.93001937866211, 179.99998474121094, 600, 3.743767023086548, 0x1.f376dp-12, 0.002460659481585026, 0.001984333386644721, 0.0014138782862573862, 2.2272236347198486, 0.07018163055181503, 0.6364403367042542, 0.3799895942211151, 4.902240753173828, 3.667203426361084, 0.0639236643910408, 0.0035090812016278505, 0.010950582101941109, 0.00949972216039896, 0.014006403274834156, 0.01047772541642189, 0.16299894452095032, 2.0324301719665527, 72.16402435302734, 0.016299894079566002, 0.10711602121591568, 0.6754729747772217, 0.002276672748848796, 6.602505891351029e-06, + ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, + 251, 1, 273.5336608886719, 1.436545491218567, 799.9601440429688, 0, 0.039894573390483856, 1.366621732711792, 19.9601058959960938, 179.99998474121094, 600, 3.545771360397339, 0.0022412477992475033, 0.0022878830786794424, 4.663517393055372e-05, 0.00147393113002181053, 2.1639299392700195, 0.0025064197834581137, 0.6027811765670776, 0.36641788482666016, 4.457954406738281, 3.313190221786499, 0.062128543853759766, 0.00012532096297945827, 0.010371451266109943, 0.0091604208573699, 0.0127370133996009827, 0.0094662467017769814, 0.1644955724477768, 2.211317777633667, 73.53292083740234, 0.01644955761730671, 0x1.d690ap-4, 0.680659294128418, 0.0021971934475004673, 0, + 251, 2, 271.50848388671875, 2.0038182735443115, 799.9590454101562, 0, 0.040993303060531616, 1.963923454284668, 19.959009170532227, 179.99998474121094, 600, 3.5523104667663574, -0.00011782348155975342, 0.0022555754985660315, 0.002373398980125785, 0.001464895554818213, 2.1591391563415527, 0.0026894453912973404, 0.6038928031921387, 0.36633092164993286, 4.442193508148193, 3.33087158203125, 0.06220299005508423, 0.0001344722550129518, 0.010390575975179672, 0.009158248081803322, 0.01269198209047317505, 0.009516766294836998, 0.16449807584285736, 2.21187424659729, 73.53244018554688, 0.016449807211756706, 0.11489550024271011, 0.6806619763374329, 0.002089059678837657, 0.00014201035082805902, + 251, 180, 290.3451843261719, 2.415818214416504, 799.5171508789062, 0, 0.4828766882419586, 1.7443971633911133, 19.51712417602539, 179.99998474121094, 600, 3.668419599533081, 0.0070009855553507805, 0.009404749609529972, 0.0024037642870098352, 0.005796163342893124, 2.1534759998321533, 0.033590685576200485, 0.6236313581466675, 0.37112849950790405, 4.586365222930908, 3.4869801998138428, 0.06358352303504944, 0.0016795347910374403, 0.01073020230978727340698, 0.009278194047510624, 0.013103900477290154, 0.009962791576981544, 0.1655682474374771, 2.2202813625335693, 73.34947967529297, 0.01655682548880577, 0.114454410970211029, 0.6809614896774292, 0.001338801346719265, 0, + 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.04857255890965462, 1.9935612678527832, 19.95142936706543, 179.99998474121094, 600, 3.797484874725342, 0.0004929341375827789, 0.0024769718293100595, 0.0019840376917272806, 0.001429187715984881, 2.2494165897369385, 0.0709228366613388, 0.6455724239349365, 0x1.8ab2p-2, 4.789840221405029, 3.636152505874634, 0.0647997334599495, 0.003546142252162099, 0.011107726953923702, 0.009636103175580502, 0.013685258105397224, 0.010388994589447975, 0.1644166260957718, 2.049516439437866, 72.92729187011719, 0.01644166186451912, 0.108148269355297089, 0.6808105707168579, 0.0022039266768842936, 0, + 251, 365, 273.3876037597656, 1.826090812683105469, 799.9301147460938, 0, 0.06991278380155563, 1.7775189876556396, 19.9300861358642578125, 179.99998474121094, 600, 3.7982163429260254, 0.0004794639535248279572, 0.0024706178810447454, 0.0019911539275199175, 0.00142781913746148348, 2.246011734008789, 0.071121446788311, 0.645696759223938, 0.3855189085006714, 4.790918350219727, 3.63693118095397949, 0.06476680189371109, 0.0035560731776058674, 0.011109866201877594, 0.00963795930147171, 0.013688337057828903, 0.010391217656433582, 0.1644132286310196, 2.050182342529297, 72.92683410644531, 0.01644132286310196, 0.10816195607185364, 0.6808135509490967, 0.00221356307156384, 2.4238115656771697e-05, ) --- # `mod_BiomeE_Pmodel_oat`: tibble::tribble( - ~year, ~CAI, ~LAI, ~Density, ~DBH, ~Density12, ~DBH12, ~QMD12, ~NPP, ~GPP, ~Rauto, ~Rh, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~plantC, ~soilC, ~totC, ~plantN, ~soilN, ~totN, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_fxed, ~N_uptk, ~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, - 1, 0.00416006101295352, 0.00620648916810751, 500, 0.675085723400116, 0, 0, 0, 0.00230823061428964138, 0.004436021205037832, 0.002127790590748191, 0.00236286548897624, 587.5296630859375, 799.9039306640625, 0, 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~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, + 1, 0.00416250666603446, 0.006210124120116234, 500, 0.6753503084182739, 0, 0, 0, 0.0023310792166739702, 0.004437046591192484, 0.0021059673745185137, 0.0023628724738955498, 587.5296630859375, 799.9039306640625, 0, 159.69195556640625, 427.93365478515625, 0.009924544021487236, 0.009370563551783562, 0.0192951075732707977, 0.0002831722085829824, 0.003793478012084961, 0.004076650366187096, 0.004243259783834219, 0, 0.0010557210771366954, 0.0006303275004029274, 0x1.2e6ee6p-10, 0.0028415448032319546, 0x1.f2c66p-13, 0, 1.8164650100516155e-05, 1.575815986143425e-05, 3.296260274510132e-06, 8.118709047266748e-06, 0.00023432944726664573, 0.00800092238932848, 0.0011353119043633342, 2.3432945454260334e-05, 0.0005318375770002604, 2.699048854992725e-05, 0.003211217001080513, 0, 0, -0.011788776144385338, 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0.2517127990722656, 0.08063244074583054, 0.33234524726867676, 0.003706026822328567505, 0.005141731351613998, 0.008847758173942566, 0.07830988615751266, 0.004114205949008465, 0.02499719336628914, 0.01492479443550109863281, 0.0758480355143547, 0.053518690168857574, 0.002327477326616645, 0.0002057102246908471, 0.00043010085937567055, 0.0003731192264240235, 0.00021670872229151428, 0.000152910390170291066, 0.00225503440015018, 0.043719563633203506, 0.03465784341096878, 0.0002255034341942519, 0.0019126012921333313, 0.00043470165110193193, 0.0025689247995615005, 0, 0.0010664527071639895, 0.0010267083998769522, 0.0005489327013492584, 0.00914375577121973, 0x1.ddc81ap-9, 0.00018225915846414864, 0x1.ddc81ap-9, 0.00018225915846414864, 16.00072479248047, 0.007513242773711681, 0.031602952629327774, 0.008355258964002132, 0.021820859983563423, 5.371998850023374e-05, 0.0037389725912362337, 0.0037389725912362337, 2.452638864517212, 1, + 251, 1.375819206237793, 3.7989466190338135, 46632.796875, 1.0767898559570312, 202.67103576660156, 0x1.5090d4p+4, 21.303977966308594, 1.4454326629638672, 2.211286783218384, 0.7658541798591614, 1.3433235883712769, 587.5296630859375, 799.9301147460938, 0, 94.1740951538086, 493.3553466796875, 11.774565696716309, 75.14306640625, 86.91763305664062, 0.11311229318380356, 0.8076682686805725, 0.92078053951263428, 2.2421305179595947, 0.07131978124380112, 0.6458209753036499, 0x1.8ad8eap-2, 4.791994571685791, 3.637706756591797, 0.06470964103937149, 0.0035659901332110167, 0.011112003587186337, 0.00963981356471777, 0.013691413216292858, 0.010393436066806316, 0.1644132286310196, 2.051492691040039, 72.92716217041016, 0.01644132286310196, 0.108195357024669647, 0.6808180809020996, 0.00221356307156384, 0, 0.022505495697259903, 0.022556107491254807, 0.02244538627564907, 0.007391450461000204, 0.06545895338058472, 0.003272948320955038, 0.06545895338058472, 0.0032729485537856817, 79.71361541748047, 0.7253342270851135, 0.2304864525794983, 0.1717321127653122, 0.6585536003112793, 0.00906318984925747, 0.8894377946853638, 0.8894377946853638, 5.523782253265381, 1, ) --- # `mod_BiomeE_Pmodel_oac_yr1`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 1, 1, 2, 1, 500, 0.00416006101295352, 0.675085723400116, 0.12427009642124176, 2.9578895568847656, 1.0000004768371582, 3.5793796996586025e-05, 1.19649812404531986e-05, 0.08320121467113495, 0.1241297796368599, 0.08450345695018768, 0.004757375922054052, 0, 0.021102063357830048, 0.01259917113929987, 0.023053081706166267, 0.05677967518568039, 0.07819932699203491, 0, 0.3117108643054962, 0.30679261684417725, 0.3814965486526489, 0.046164609491825104, 0.0887204185128212, 0.042555809020996094, 0, 0, 0.01055467501282692, 2.98883514915360138e-06, 0.00010451104026287794, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 1, 1, 2, 1, 500, 0.00416250666603446, 0.6753503084182739, 0.12453463673591614, 2.9584689140319824, 1.0000004768371582, 3.582185672712512e-05, 1.19930409709922969e-05, 0.08325012773275375, 0.12420248240232468, 0.08486519008874893, 0.004756688140332699, 0, 0.021114422008395195, 0.012606550008058548, 0.0230738222599029541, 0.05683089420199394, 0.07829460501670837, 0, 0.31149959564208984, 0.30654868483543396, 0.3819516897201538, 0.04662158340215683, 0.08874092996120453, 0.0421193465590477, 0, 0, 0.01055500097572803497, 2.988882670251769e-06, 0.00010475356975803152, ) --- # `mod_BiomeE_Pmodel_oac_yr2`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 2, 1, 2, 1, 494.7226867675781, 0.005102669820189476, 0.7790457010269165, 0.103959955275058746, 3.177488327026367, 0x1.fffea4p+0, 4.766677739098668e-05, 1.1872980394400656e-05, 0.10314202308654785156, 0.196566283702850342, 0.1047508642077446, 0.00369688356295228, 0, 0.0334162674844265, 0.0199514739215374, 0.04066816717386246, 0.07031325995922089, 0.07557028532028198, 0, 0.2360706627368927, 0.3517475426197052, 0.4121817350387573, 0.0958176702260971, 0.1389899104833603, 0.043172240257263184, 0, 0, 0.010687612928450108, 2.6900818284048e-06, 0.0001422840723535046, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 2, 1, 2, 1, 494.7225036621094, 0.005111239850521088, 0.7799178957939148, 0.104567594826221466, 3.1792666912078857, 0x1.fffea4p+0, 4.777356298291124403e-05, 1.19517062557861209e-05, 0.10331528633832932, 0.19689592719078064, 0.10555817931890488, 0.003693532897159457, 0, 0.03347230702638626, 0.019984934478998184, 0.04077288135886192, 0.07049454003572464, 0.07588209211826324, 0, 0.23575858771800995, 0.3509331941604614, 0.4133082330226898, 0.0965750366449356079, 0.1391470581293106, 0.0425720252096653, 0, 0, 0.0106887686997652054, 2.6899847398453858e-06, 0.00014292488049250096, ) --- # `mod_BiomeE_Pmodel_oac_yr251`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 251, 453, 2, 1, 6186.78271484375, 0.7524369359016418, 4.035921096801758, 0.24162381887435913, 7.232256889343262, 25.635595321655273, 0.0012793083442375064, 0.00014859484508633614, 1.21620070934295654, 0x1.ea3fa4p+1, 2.2883107662200928, 0.06006774306297302, 0.07175862789154053, 0.6511114239692688, 0.3887517750263214, 2.8879141807556152, 1.9910048246383667, 1.3824138641357422, 0.051908209919929504, 0.13415786623954773, 0.3467600345611572, 0.46717384457588195801, 1.608022689819336, 2.3995113372802734, 0.7914886474609375, 0.0259014256298542023, 0, 0.018108004704117775, 0.0011036914074793458, 0.09274822473526000977, - 251, 399, 2, 1, 194.831878662109375, 0.3017839789390564, 22.010501861572266, 0.4155859351158142, 16.8895263671875, 77.76274108886719, 0.03804957494139671, 0.0014232844114303589, 15.489456176757812, 48.78794860839844, 35.392906188964844, 0.7681367993354797, 1.150437831878662, 8.293951034545898, 4.9519758224487305, 142.9010467529297, 98.48064422607422, 19.416580200195312, 0.059250280261039734, 0.098708510398864746, 0.30878883600234985, 0.5332523584365845, 20.45547103881836, 31.54172706604004, 11.08625602722168, 0.2924974858760834, 0, 0.11326304078102112, 0.0039319987408816814, 0.6425342559814453, - 251, 405, 2, 1, 0x1.36af7p+4, 0.021548453718423843, 17.623119354248047, 0.3913283348083496, 15.112764358520508, 77.76273345947266, 0.024392450228333473, 0.00107125937938690186, 11.097250938415527, 34.95310592651367, 24.976856231689453, 0.5510115623474121, 0.8096410632133484, 5.942028045654297, 3.5477399826049805, 85.6981430053711, 59.06095886230469, 0x1.b9874p+3, 0.05867916718125343, 0.101414337754249573, 0.3117941617965698, 0.5281122922897339, 14.66521453857421875, 22.5409832000732422, 7.875769138336182, 0.21382656693458557, 0, 0.08398167043924332, 0.0001950404403032735, 0.02935912273824215, - 251, 451, 2, 2, 1437.6427001953125, 0.13790275156497955, 3.4452478885650635, 0.07297582924365997, 6.682096481323242, 25.635595321655273, 0x1.e8c408p-11, 3.907468635588884354e-05, 0x1.eb1ff8p-1, 1.5106961727142334, 0.331826776266098, 0.023750562220811844, 0.011593114584684372, 0.25681835412979126, 0.15333564579486847, 1.0321849584579468, 2.358306407928467, 0.350735068321228, 0.033053766936063766, 0.04586340859532356, 0.45660558342933655, 0.4644772708415985, 0.05835483968257904, 0.24708278477191925, 0.1887279450893402, 0.0007397927693091333, 0, 0.15239863097667694, 0.00092610338469967246, 0.090794317424297333, - 251, 433, 2, 2, 133.359130859375, 0.003309910651296377, 1.398947834968567, 0.0026108697056770325, 4.257976531982422, 22.621503829956055, 0.00015370674373116344, 5.731999408453703e-07, 0.24819529056549072, 0.08800467103719711, 0.000859237217810005, 0.006141125224530697, 0.02475515753030777, 0.0149607937783002853, 0.008719232864677906, 0.1298724114894867, 0.2967061698436737, 0.036946821957826614, 0.6700212955474854, 0.021222852170467377, 0.2592589855194092, 0.04949680715799332, 0.012063284404575825, 0.01976441591978073, 0.00770113151520490646, 0.00027562450850382447, 0, 0.2660006582736969, 3.218547863070853e-05, 0.00168809364549815655, - 251, 25, 2, 2, 38045.5390625, 0.12791907787322998, 0.3690004348754883, 0.0290364492684602737, 2.1868345737457275, 2.812093734741211, 1.069408517651027e-05, 1.6168050933629274e-06, 0.0336226224899292, 0.03630615770816803, 0.005750085227191448, 0.00188525731209665537, 0, 0.00617204699665308, 0.003685074858367443, 0.004184719640761614, 0.0157136470079422, 0.010590702295303345, 0, 0.3132511079311371, 0.36395764350891113, 0.32279127836227417, 0.00044997688382864, 0.006174805574119091, 0.005724828690290451, 0, 0, 0.35192495584487915, 0.0028658623341470957, 0x1.857094p-5, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 251, 453, 2, 1, 6204.3662109375, 0.781042218208313, 4.129751205444336, 0x1.f7454ep-3, 7.3158440589904785, 25.779739379882812, 0.0013394845882430673, 0.00015466718468815088, 1.2588590383529663, 3.964414358139038, 2.396291971206665, 0.06221679598093033, 0.07521170377731323, 0.6739504337310791, 0.4023880362510681, 3.0446815490722656, 2.099076271057129, 1.4398750066757202, 0.05223488435149193, 0.13310246169567108, 0.3445485532283783, 0.4701140820980072, 1.6745383739471436, 2.48441481590271, 0.8098765015602112, 0.02681770920753479, 0, 0.018392393365502357, 0.00116771424654871225, 0.09918257594108582, + 251, 397, 2, 1, 149.41921997070312, 0.24800805747509003, 23.04864501953125, 0.424426794052124, 17.283241271972656, 79.71361541748047, 0.041723497211933136, 0.00152247771620750427, 16.59813690185547, 52.280128479003906, 38.35758590698242, 0.8215985894203186, 1.2478489875793457, 8.887621879577637, 5.306432247161865, 158.8809356689453, 109.49272918701172, 20.950157165527344, 0.05956275016069412, 0.0977684110403060913, 0.30660390853881836, 0.5360649228096008, 22.047210693359375, 33.81137466430664, 11.764163970947266, 0.3125823736190796, 0, 0.12065424770116806, 0.0034908705856651068, 0.5808157920837402, + 251, 405, 2, 1, 53.251808166503906, 0.04820876568555832, 15.386279106140137, 0x1.85289cp-2, 14.12112522125244140625, 79.71360778808594, 0.018593326210975647, 0.00090715847909450531, 9.05298137664795, 28.51395606994629, 20.331798553466797, 0.44778183102607727, 0.6580069065093994, 4.847372531890869, 2.8941659927368164, 62.71681594848633, 43.22386169433594, 11.25114822387695312, 0.058483533561229706, 0.102879956364631653, 0.312284916639328, 0.5263516306877136, 12.039875030517578, 18.3539142608642578125, 6.3140387535095215, 0.17407317459583282, 0, 0.07035320997238159, 0.00035183815634809434, 0.05045400932431221, + 251, 451, 2, 2, 1829.4735107421875, 0.16942362487316132, 3.365407943725586, 0.06579309701919556, 6.604217052459717, 25.779739379882812, 0.0008895396604202688, 3.444071626290679e-05, 0.9260785579681396, 1.4584969282150269, 0.28346580266952515, 0.02300185151398182, 0.013700224459171295, 0.24794448912143707, 0.14803743362426758, 0.97800147533416748, 2.234492063522339, 0.3307599723339081, 0.04142044112086296, 0.05487056449055672, 0.4725307822227478, 0.431178182363510132, 0.06103000044822693, 0.2366011142730713, 0.17557111382484436, 0.001471759751439094543, 0, 0.1553182750940323, 0.0011602576123550534, 0.11097906529903412, + 251, 25, 2, 2, 38396.28515625, 0.129136696457862854, 0.36907342076301575, 0.02906501665711403, 2.1870508193969727, 2.8104193210601807, 1.069831705535762e-05, 1.618665010028053e-06, 0.03363259881734848, 0.036316920071840286, 0.005760264582931995, 0.00188537896610796452, 0, 0.006173876579850912, 0.003686167299747467, 0.00418661767616868, 0.015720801427960396, 0.0105964895337820053, 0, 0.31301701068878174, 0.3639802634716034, 0.32300275564193726, 0.0004636230878531933, 0.00615537166595459, 0.0056917485781013966, 0, 0, 0.35191845893859863, 0.002892508404329419, 0.04800635203719139, ) --- @@ -138,13 +137,13 @@ # `mod_BiomeE_PLULUC_aggregated`: tibble::tribble( - ~year, ~CAI, ~LAI, ~Density, ~DBH, ~Density12, ~DBH12, ~QMD12, ~NPP, ~GPP, ~Rauto, ~Rh, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~plantC, ~soilC, ~totC, ~plantN, ~soilN, ~totN, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_fxed, ~N_uptk, ~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, ~prod_pool_1_C, ~prod_pool_1_N, ~prod_pool_2_C, ~prod_pool_2_N, ~Rprod_0_C, ~Rprod_0_N, ~Rprod_1_C, ~Rprod_1_N, ~Rprod_2_C, ~Rprod_2_N, - 1, 0.00416006101295352, 0.00620648916810751, 500, 0.675085723400116, 0, 0, 0, 0.00230823061428964138, 0.004436021205037832, 0.002127790590748191, 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0.06545896828174591, 0.0032729494851082563, 79.713623046875, 79.713623046875, 79.713623046875, 0.1717321276664734, 0.6585536003112793, 0.0090618608519434929, 0.8894376754760742, 0.8894376754760742, 5.523782253265381, 1, 1.401298464324817e-45, 1.401298464324817e-45, 1.3975054447001867e-09, 3.992874607339214e-12, 0, 0, 0, 0, 6.815710495988725e-11, 1.947346770598754e-13, ) --- @@ -163,54 +162,53 @@ # `mod_BiomeE_PLULUC_primary_odt_yr251`: tibble::tribble( - ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, - 251, 1, 273.5336608886719, 1.436545491218567, 799.9600830078125, 0, 0.03994165733456611633, 1.3665517568588257, 19.960058212280273, 179.99998474121094, 600, 3.492227792739868, 0.0022163810208439827, 0.0022776268888264894, 6.124589708633721e-05, 0.00146035687066614628, 2.143047571182251, 0.0019968082197010517, 0.5936786532402039, 0.36092817783355713, 4.567693710327148, 3.351698875427246, 0.06145501136779785, 9.9840384791605175e-05, 0.0102148223668336868, 0.009023189544677734, 0.01305055245757103, 0.0095762824639678, 0.16301999986171722, 2.195016622543335, 72.76547241210938, 0.016302000731229782, 0x1.d20c5p-4, 0.6753336787223816, 0.0022190751042217016, 0.00014529678446706384, - 251, 2, 271.50848388671875, 2.0038182735443115, 799.958984375, 0, 0.041029613465070724487, 0x1.f6c0a8p+0, 19.95897102355957, 179.99998474121094, 600, 3.498727321624756, -0.00012322585098445415, 0.0022454638965427876, 0.0023686897475272417, 0.00145139975938946, 2.13828444480896, 0.00217894883826375, 0.59478360414505, 0.3608582615852356, 4.553348541259766, 3.3679449558258057, 0.06138777360320091, 0.00010894741717493162, 0.010233834385871887, 0.0090214414522051811, 0.013009566813707352, 0.009622699581086636, 0.16302262246608734, 2.1955597400665283, 72.76499938964844, 0.016302261501550674, 0.1137925386428833, 0.6753363013267517, 0.00225251168012619, 0, - 251, 180, 290.3451843261719, 2.415818214416504, 799.5160522460938, 0, 0.4839525520801544, 0x1.be2cb8p+0, 19.516048431396484, 179.99998474121094, 600, 3.61742639541625977, 0.006934003438800573, 0.0093658901751041412, 0.002431886736303568, 0.0057413917966187, 2.1303770542144775, 0.03290090337395668, 0.6149625778198242, 0.36590710282325745, 4.699373722076416, 3.5189948081970215, 0.06294948607683182, 0.00164504500571638346, 0.010581032373011112, 0.009147659875452518, 0.01342678256332874298, 0.010054271668195724, 0.16411568224430084, 2.2025346755981445, 72.58417510986328, 0.016411568969488144, 0x1.d047e6p-4, 0.6756302714347839, 0.0012345561990514398, 0.00043321942212060094, - 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.04862569645047188, 1.9935002326965332, 19.95137596130371, 179.99998474121094, 600, 0x1.df1c46p+1, 0.000492400024086237, 0.0024669859558343887, 0.00197458593174815178, 0.0014152369694784284, 2.230586528778076, 0.0699843242764473, 0.636318564414978, 0.3799169957637787, 4.901171684265137, 3.666433334350586, 0.06397349387407303, 0.0034992159344255924, 0.010948486626148224, 0.0094979070127010345, 0.0140033476054668427, 0.0104755237698555, 0.16300229728221893, 2.03177762031555176, 72.16447448730469, 0.016300229355692863, 0.10710261017084122, 0.6754700541496277, 0.0022499526385217905, 7.749247015453875e-05, - 251, 365, 273.3876037597656, 1.826090812683105469, 799.9300537109375, 0, 0.06998022645711899, 1.7774653434753418, 19.93001937866211, 179.99998474121094, 600, 3.743767023086548, 0x1.f376dp-12, 0.002460659481585026, 0.001984333386644721, 0.0014138782862573862, 2.2272236347198486, 0.07018163055181503, 0.6364403367042542, 0.3799895942211151, 4.902240753173828, 3.667203426361084, 0.0639236643910408, 0.0035090812016278505, 0.010950582101941109, 0.00949972216039896, 0.014006403274834156, 0.01047772541642189, 0.16299894452095032, 2.0324301719665527, 72.16402435302734, 0.016299894079566002, 0.10711602121591568, 0.6754729747772217, 0.002276672748848796, 6.602505891351029e-06, + ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, + 251, 1, 273.5336608886719, 1.436545491218567, 799.9601440429688, 0, 0.039894573390483856, 1.366621732711792, 19.9601058959960938, 179.99998474121094, 600, 3.545771360397339, 0.0022412477992475033, 0.0022878830786794424, 4.663517393055372e-05, 0.00147393113002181053, 2.1639299392700195, 0.0025064197834581137, 0.6027811765670776, 0.36641788482666016, 4.457954406738281, 3.313190221786499, 0.062128543853759766, 0.00012532096297945827, 0.010371451266109943, 0.0091604208573699, 0.0127370133996009827, 0.0094662467017769814, 0.1644955724477768, 2.211317777633667, 73.53292083740234, 0.01644955761730671, 0x1.d690ap-4, 0.680659294128418, 0.0021971934475004673, 0, + 251, 2, 271.50848388671875, 2.0038182735443115, 799.9590454101562, 0, 0.040993303060531616, 1.963923454284668, 19.959009170532227, 179.99998474121094, 600, 3.5523104667663574, -0.00011782348155975342, 0.0022555754985660315, 0.002373398980125785, 0.001464895554818213, 2.1591391563415527, 0.0026894453912973404, 0.6038928031921387, 0.36633092164993286, 4.442193508148193, 3.33087158203125, 0.06220299005508423, 0.0001344722550129518, 0.010390575975179672, 0.009158248081803322, 0.01269198209047317505, 0.009516766294836998, 0.16449807584285736, 2.21187424659729, 73.53244018554688, 0.016449807211756706, 0.11489550024271011, 0.6806619763374329, 0.002089059678837657, 0.00014201035082805902, + 251, 180, 290.3451843261719, 2.415818214416504, 799.5171508789062, 0, 0.4828766882419586, 1.7443971633911133, 19.51712417602539, 179.99998474121094, 600, 3.668419599533081, 0.0070009855553507805, 0.009404749609529972, 0.0024037642870098352, 0.005796163342893124, 2.1534759998321533, 0.033590685576200485, 0.6236313581466675, 0.37112849950790405, 4.586365222930908, 3.4869801998138428, 0.06358352303504944, 0.0016795347910374403, 0.01073020230978727340698, 0.009278194047510624, 0.013103900477290154, 0.009962791576981544, 0.1655682474374771, 2.2202813625335693, 73.34947967529297, 0.01655682548880577, 0.114454410970211029, 0.6809614896774292, 0.001338801346719265, 0, + 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.04857255890965462, 1.9935612678527832, 19.95142936706543, 179.99998474121094, 600, 3.797484874725342, 0.0004929341375827789, 0.0024769718293100595, 0.0019840376917272806, 0.001429187715984881, 2.2494165897369385, 0.0709228366613388, 0.6455724239349365, 0x1.8ab2p-2, 4.789840221405029, 3.636152505874634, 0.0647997334599495, 0.003546142252162099, 0.011107726953923702, 0.009636103175580502, 0.013685258105397224, 0.010388994589447975, 0.1644166260957718, 2.049516439437866, 72.92729187011719, 0.01644166186451912, 0.108148269355297089, 0.6808105707168579, 0.0022039266768842936, 0, + 251, 365, 273.3876037597656, 1.826090812683105469, 799.9301147460938, 0, 0.06991278380155563, 1.7775189876556396, 19.9300861358642578125, 179.99998474121094, 600, 3.7982163429260254, 0.0004794639535248279572, 0.0024706178810447454, 0.0019911539275199175, 0.00142781913746148348, 2.246011734008789, 0.071121446788311, 0.645696759223938, 0.3855189085006714, 4.790918350219727, 3.63693118095397949, 0.06476680189371109, 0.0035560731776058674, 0.011109866201877594, 0.00963795930147171, 0.013688337057828903, 0.010391217656433582, 0.1644132286310196, 2.050182342529297, 72.92683410644531, 0.01644132286310196, 0.10816195607185364, 0.6808135509490967, 0.00221356307156384, 2.4238115656771697e-05, ) --- # `mod_BiomeE_PLULUC_primary_oat`: tibble::tribble( - ~year, ~CAI, ~LAI, ~Density, ~DBH, ~Density12, ~DBH12, ~QMD12, ~NPP, ~GPP, ~Rauto, ~Rh, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~plantC, ~soilC, ~totC, ~plantN, ~soilN, ~totN, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_fxed, ~N_uptk, ~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, - 1, 0.00416006101295352, 0.00620648916810751, 500, 0.675085723400116, 0, 0, 0, 0.00230823061428964138, 0.004436021205037832, 0.002127790590748191, 0.00236286548897624, 587.5296630859375, 799.9039306640625, 0, 159.69207763671875, 427.9336242675781, 0.009901872836053371, 0.00937039777636528, 0.0192722715437412262, 0.00028317642863839865, 0x1.f137dp-9, 0.004076648969203234, 0.004225173033773899, 0, 0.001055103144608438, 0.0006299585802480578, 0.001152654062025249, 0.0028389838989824057, 0.00023786879319231957, 0, 1.8153990822611377e-05, 1.5748948499094695e-05, 3.2932978228927823e-06, 8.111390343401581e-06, 0.00023432880698237568, 0.008000791072845459, 0.0011352773290127516, 2.3432879970641807e-05, 0.0005318309995345771, 2.6989993784809485e-05, 0.003211218398064375, 0, 0, -0.011788776144385338, 2.004480666073505e-05, 0.021915264427661896, 0, 0, 0, 0, 1.0000004768371582, 0.00021576420112978667, 0.006750857457518578, 0.0012187790125608444, 0.00149163871537894, 2.98883514915360138e-06, 0.00010451104026287794, 0.00010451104026287794, 1.903265118598938, 0.6000000238418579, - 2, 0.005102669820189476, 0.0097245797514915466, 494.7226867675781, 0.7790457010269165, 0, 0, 0, 0.004740317817777395, 0.006876146420836449, 0.0021358286030590534, 0.002067615743726492, 587.5296630859375, 799.9039916992188, 0, 159.5333709716797, 427.9958190917969, 0.0133129898458719254, 0.008631981909275055, 0.02194497175514698, 0.00025170089793391526, 0.0033796075731515884, 0x1.dbf67ep-9, 0.005182262975722551, 0, 0.001653178595006466, 0.000987044651992619, 0.002011946402490139, 0.0034785564057528973, 0.00018289321451447904, 0, 2.844444134098012e-05, 2.4676073735463433e-05, 5.74841851630481e-06, 9.93875164567725733e-06, 0.000333371659507975, 0.006881603505462408, 0.0014170072972774506, 3.3337164495605975e-05, 0.00045158033026382327, 3.060470407945104e-05, 0.0028640853706747293, 0, 0, -0.00034713471541181207, 3.117664164165035e-05, 0.01044533122330904, 0, 0, 0, 0, 0x1.fffea4p+0, 0.0002999498101416975, 0.0077904569916427135, 0.0008825816912576556, 0.001540996367111802, 2.6900818284048e-06, 0.0001422840723535046, 0.0001422840723535046, 2.2573423385620117, 0.6000000238418579, - 8, 0.013795845210552216, 0.043438203632831573, 462.5356140136719, 1.58127689361572266, 0, 0, 0, 0.018087781965732574, 0.02632727287709713, 0.00823948998004198, 0.003437593812122941, 587.5296630859375, 799.9047241210938, 0, 157.8964385986328, 429.63287353515625, 0.06043722853064537, 0.02025231532752514, 0.08068954199552536, 0.0010730837238952518, 0.0034775149542838335, 0.004550598561763763, 0.020957954227924347, 0.0015329577727243304, 0.007384494878351688, 0.004408976994454861, 0.0154777215793728828, 0.010675124824047089, 0.0006844316958449781, 7.664794247830287e-05, 0.00012705731205642223, 0.0001102242385968566, 4.422206257004291e-05, 3.0500354114337824e-05, 0.0006441998411901295, 0.0125162666663527489, 0.007091848645359278, 6.441998266382143e-05, 0.0005617294809781015, 0.000103921986010391265, 0.0027474435046315193, 0, 0.00032886757981032133, 0.0003178543702233583, 0.00015892539522610605, 0.009739045985043049, 0, 0, 0, 0, 8.000199317932129, 0.0015281712403520942, 0.015812769532203674, 0.002488272963091731, 0.005662989336997271, 1.2864595191786066e-05, 0.0007245478918775916, 0.0007245478918775916, 1.8850688934326172, 0.6000000238418579, - 9, 0.01586153730750084, 0.04994339123368263, 0x1.c8fd94p+8, 1.749435305595398, 0, 0, 0, 0.02079915627837181, 0.03038853034377098, 0.00958937406539917, 0.00402783090248703957, 587.5296630859375, 799.9048461914062, 0, 157.5865478515625, 429.9427185058594, 0.07326323539018631, 0.024197641760110855, 0.09746088087558746, 0.00126732804346829653, 0.0035847225226461887, 0.0048520504496991634, 0.024836985394358635, 0.002265852177515626, 0.008490377105772495, 0.005069253500550985, 0.019294103607535362244, 0.0133066605776548386, 0.0007880740449763834, 0.00011329252447467297316, 0.00014608509081881493, 0.00012673134915530682, 5.512601273949258e-05, 3.801902130362578e-05, 0.0007513119489885867, 0.0146127725020051, 0.008833558298647404, 7.513119635405019e-05, 0.0006484040059149265, 0.00012589940160978585482, 0.002735287882387638, 0, 0.00037571266875602305, 0.00036355890915729105, 0.0001842098427005112171, 0.009698555804789066, 0, 0, 0, 0, 9.000265121459961, 0.0019280525157228112, 0.017494352534413338, 0.0028124162927269936, 0.0067614419385790825, 1.560576492920518e-05, 0.0009021569276228547096, 0.0009021569276228547096, 1.96802115440368652344, 0.6000000238418579, - 16, 0.04717395454645157, 0.14403022825717926, 1980.699951171875, 1.170452356338501, 0, 0, 0, 0.06059445068240166, 0.08904117345809937, 0.028446722775697708, 0.011893595568835735, 587.5296630859375, 799.9066772460938, 0, 153.37054443359375, 434.1585388183594, 0.24461477994918823, 0.0789027214050293, 0.32351750135421753, 0.0036160575691610575, 0.005097606219351292, 0.008713663555681705, 0.07573910057544708, 0.0038610973861068487, 0.024485142901539803, 0.014619069173932076, 0.07390470057725906, 0.05200567841529846, 0.002276492537930608, 0.00019305504974909127, 0.000421290256781503558, 0.000365476036677137, 0.00021115630806889385, 0.00014858735084999353, 0.002202600007876754, 0.04273547977209091, 0.03396464139223099, 0.000220260000787675380707, 0.0018694618484005332, 0.00042649966781027615, 0.00258138473145663738, 0, 0.0010222707642242312, 0.0010046518873423338, 0.0005385457770898938, 0.0091620385646820068, 0.003569950582459569, 0.00017849770665634423, 0.003569950582459569, 0.00017849770665634423, 16.00072479248047, 0x1.e35da4p-8, 0.031349871307611465, 0.008084829896688461, 0.0210112314671278, 5.229873568168841e-05, 0.0036270359996706247, 0.0036270359996706247, 2.47513699531555176, 0.6000000238418579, - 251, 1.344901204109192, 3.7444820404052734, 46017.57421875, 1.0599936246871948, 214.2497100830078, 21.612865447998047, 21.649534225463867, 1.43212532997131348, 2.202106237411499, 0.7699809670448303, 1.3305543661117554, 587.5296630859375, 799.9300537109375, 0, 94.3527069091796875, 493.17681884765625, 11.881671905517578, 74.36106872558594, 86.24273681640625, 0.1123297587037086487, 0.8012029528617859, 0x1.d3ba9p-1, 2.2233872413635254, 0.07037865370512009, 0.636561930179596, 0.3800620436668396, 4.903309345245361, 3.6679725646972656, 0.0638672485947609, 0.0035189322661608458, 0.01095267478376627, 0.009501533582806587, 0.01400945521891117096, 0.010479922406375408, 0.16299894452095032, 2.033721685409546, 72.16434478759766, 0.016299894079566002, 0.107148937880992889, 0.6754774451255798, 0.002276672748848796, 0, 0.02224866673350334, 0.02219376154243946, 0.0222482495009899139, 0.007512892596423626, 0.06490720063447952, 0.00324535951949656, 0.06490720063447952, 0.00324535951949656, 77.76274108886719, 0.6523829102516174, 0x1.c2c66cp-3, 0.16974419355392456, 0.6518874764442444, 0x1.28b5dcp-7, 0.9046630263328552, 0.9046630263328552, 5.62669563293457, 0.6000000238418579, + ~year, ~CAI, ~LAI, ~Density, ~DBH, ~Density12, ~DBH12, ~QMD12, ~NPP, ~GPP, ~Rauto, ~Rh, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~plantC, ~soilC, ~totC, ~plantN, ~soilN, ~totN, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_fxed, ~N_uptk, ~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, + 1, 0.00416250666603446, 0.006210124120116234, 500, 0.6753503084182739, 0, 0, 0, 0.0023310792166739702, 0.004437046591192484, 0.0021059673745185137, 0.0023628724738955498, 587.5296630859375, 799.9039306640625, 0, 159.69195556640625, 427.93365478515625, 0.009924544021487236, 0.009370563551783562, 0.0192951075732707977, 0.0002831722085829824, 0.003793478012084961, 0.004076650366187096, 0.004243259783834219, 0, 0.0010557210771366954, 0.0006303275004029274, 0x1.2e6ee6p-10, 0.0028415448032319546, 0x1.f2c66p-13, 0, 1.8164650100516155e-05, 1.575815986143425e-05, 3.296260274510132e-06, 8.118709047266748e-06, 0.00023432944726664573, 0.00800092238932848, 0.0011353119043633342, 2.3432945454260334e-05, 0.0005318375770002604, 2.699048854992725e-05, 0.003211217001080513, 0, 0, -0.01178877800703048706, 2.004899761232081801e-05, 0.021915258839726448, 0, 0, 0, 0, 1.0000004768371582, 0x1.c4e5f2p-13, 0.006753502879291773, 0.0012194368755444884, 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0.01044532656669616699, 0, 0, 0, 0, 0x1.fffea4p+0, 0.00030072274967096746, 0.0077991788275539875, 0.0008850513841025531, 0.00155158306006342173, 2.6899847398453858e-06, 0.00014292488049250096, 0.00014292488049250096, 2.2477195262908936, 0.6000000238418579, + 8, 0.013906870037317276, 0.043787699192762375, 462.5186462402344, 1.5897880792617798, 0, 0, 0, 0.01834146678447723389, 0.0265294201672077179, 0.00818795245140791, 0.0034570074640214443, 587.5296630859375, 799.9047241210938, 0, 157.8809814453125, 429.6481628417969, 0.06122784316539764404, 0.020369375124573708, 0.0815972164273262, 0.0010830140672624111, 0.00347965769469738, 0.004562671761959791, 0.02130504697561264, 0.0015576676232740283, 0.00744390906766057, 0.004444451071321964, 0.015669401735067368, 0.0108073707669973373413, 0.0006902921013534069, 7.788345101289451e-05, 0.00012807949678972363, 0.000111111010483000427, 4.476971662370488e-05, 3.0878218240104616e-05, 0.0006472131353802979, 0.012593458406627178, 0.007128703873604536, 6.472131644841284e-05, 0.0005646665813401341, 0.00010436776938149706, 0.002745901932939887, 0, 0.0003319511888548732, 0.000321338651701808, 0.00016018083260860294, 0.009735604748129845, 0, 0, 0, 0, 8.000199317932129, 0.0015471557853743434, 0.015897881239652634, 0.0025127814151346684, 0.005758278071880341, 1.3001056686334778e-05, 0.0007350104860961437, 0.0007350104860961437, 1.8768407106399536, 0.6000000238418579, + 9, 0.016000162810087204, 0.050379808992147446, 456.96630859375, 1.7596757411956787, 0, 0, 0, 0.021106015890836716, 0.030644193291664124, 0.009538178332149982, 0.004054611548781395, 587.5296630859375, 799.9048461914062, 0, 157.56739807128906, 429.9620666503906, 0.07428936660289764, 0.02435925602912903, 0x1.941094p-4, 0.001279305899515748, 0.0035889181308448315, 0.004868224263191223, 0.025268159806728363, 0.002303489251062274, 0.008564568124711514, 0.005113549996167421, 0.019553789868950844, 0.01348581444472074509, 0.0007945323013700545, 0.0001151745091192424297, 0.00014736161392647773, 0.00012783858983311802, 5.586797124124132e-05, 3.8530917663592845e-05, 0.0007556240307167172, 0.014716660603880882, 0.008886972442269325, 7.556240598205477e-05, 0.0006524593918584287, 0.0001265366590814665, 0.00273435958661139, 0, 0.00037931359838694334, 0.000367771222954615951, 0.00018579905736260116, 0x1.3daaf2p-7, 0.0022750776261091232, 0.000113753914774861187, 0.0022750776261091232, 0.000113753907498903573, 9.000265121459961, 0.001954109640792012, 0.017596757039427757, 0.0028416116256266832, 0.006880678236484528, 1.577928924234584e-05, 0.000916304241400212, 0.000916304241400212, 1.9599542617797852, 0.6000000238418579, + 16, 0.04833274334669113, 0.14704228937625885, 2009.9169921875, 1.1782575845718384, 0, 0, 0, 0.06215196475386619567871, 0.09093406051397324, 0.02878209576010704, 0.012174996547400951, 587.5296630859375, 799.90673828125, 0, 153.25502014160156, 434.2740173339844, 0.2517127990722656, 0.08063244074583054, 0.33234524726867676, 0.003706026822328567505, 0.005141731351613998, 0.008847758173942566, 0.07830988615751266, 0.004114205949008465, 0.02499719336628914, 0.01492479443550109863281, 0.0758480355143547, 0.053518690168857574, 0.002327477326616645, 0.0002057102246908471, 0.00043010085937567055, 0.0003731192264240235, 0.00021670872229151428, 0.000152910390170291066, 0.00225503440015018, 0.043719563633203506, 0.03465784341096878, 0.0002255034341942519, 0.0019126012921333313, 0.00043470165110193193, 0.0025689247995615005, 0, 0.0010664527071639895, 0.0010267083998769522, 0.0005489327013492584, 0.00914375577121973, 0x1.ddc81ap-9, 0.00018225915846414864, 0x1.ddc81ap-9, 0.00018225915846414864, 16.00072479248047, 0.007513242773711681, 0.031602952629327774, 0.008355258964002132, 0.021820859983563423, 5.371998850023374e-05, 0.0037389725912362337, 0.0037389725912362337, 2.452638864517212, 0.6000000238418579, + 251, 1.375819206237793, 3.7989466190338135, 46632.796875, 1.0767898559570312, 202.67103576660156, 0x1.5090d4p+4, 21.303977966308594, 1.4454326629638672, 2.211286783218384, 0.7658541798591614, 1.3433235883712769, 587.5296630859375, 799.9301147460938, 0, 94.1740951538086, 493.3553466796875, 11.774565696716309, 75.14306640625, 86.91763305664062, 0.11311229318380356, 0.8076682686805725, 0.92078053951263428, 2.2421305179595947, 0.07131978124380112, 0.6458209753036499, 0x1.8ad8eap-2, 4.791994571685791, 3.637706756591797, 0.06470964103937149, 0.0035659901332110167, 0.011112003587186337, 0.00963981356471777, 0.013691413216292858, 0.010393436066806316, 0.1644132286310196, 2.051492691040039, 72.92716217041016, 0.01644132286310196, 0.108195357024669647, 0.6808180809020996, 0.00221356307156384, 0, 0.022505495697259903, 0.022556107491254807, 0.02244538627564907, 0.007391450461000204, 0.06545895338058472, 0.003272948320955038, 0.06545895338058472, 0.0032729485537856817, 79.71361541748047, 0.7253342270851135, 0.2304864525794983, 0.1717321127653122, 0.6585536003112793, 0.00906318984925747, 0.8894377946853638, 0.8894377946853638, 5.523782253265381, 0.6000000238418579, ) --- # `mod_BiomeE_PLULUC_primary_oac_yr1`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 1, 1, 2, 1, 500, 0.00416006101295352, 0.675085723400116, 0.12427009642124176, 2.9578895568847656, 1.0000004768371582, 3.5793796996586025e-05, 1.19649812404531986e-05, 0.08320121467113495, 0.1241297796368599, 0.08450345695018768, 0.004757375922054052, 0, 0.021102063357830048, 0.01259917113929987, 0.023053081706166267, 0.05677967518568039, 0.07819932699203491, 0, 0.3117108643054962, 0.30679261684417725, 0.3814965486526489, 0.046164609491825104, 0.0887204185128212, 0.042555809020996094, 0, 0, 0.01055467501282692, 2.98883514915360138e-06, 0.00010451104026287794, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 1, 1, 2, 1, 500, 0.00416250666603446, 0.6753503084182739, 0.12453463673591614, 2.9584689140319824, 1.0000004768371582, 3.582185672712512e-05, 1.19930409709922969e-05, 0.08325012773275375, 0.12420248240232468, 0.08486519008874893, 0.004756688140332699, 0, 0.021114422008395195, 0.012606550008058548, 0.0230738222599029541, 0.05683089420199394, 0.07829460501670837, 0, 0.31149959564208984, 0.30654868483543396, 0.3819516897201538, 0.04662158340215683, 0.08874092996120453, 0.0421193465590477, 0, 0, 0.01055500097572803497, 2.988882670251769e-06, 0.00010475356975803152, ) --- # `mod_BiomeE_PLULUC_primary_oac_yr2`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 2, 1, 2, 1, 494.7226867675781, 0.005102669820189476, 0.7790457010269165, 0.103959955275058746, 3.177488327026367, 0x1.fffea4p+0, 4.766677739098668e-05, 1.1872980394400656e-05, 0.10314202308654785156, 0.196566283702850342, 0.1047508642077446, 0.00369688356295228, 0, 0.0334162674844265, 0.0199514739215374, 0.04066816717386246, 0.07031325995922089, 0.07557028532028198, 0, 0.2360706627368927, 0.3517475426197052, 0.4121817350387573, 0.0958176702260971, 0.1389899104833603, 0.043172240257263184, 0, 0, 0.010687612928450108, 2.6900818284048e-06, 0.0001422840723535046, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 2, 1, 2, 1, 494.7225036621094, 0.005111239850521088, 0.7799178957939148, 0.104567594826221466, 3.1792666912078857, 0x1.fffea4p+0, 4.777356298291124403e-05, 1.19517062557861209e-05, 0.10331528633832932, 0.19689592719078064, 0.10555817931890488, 0.003693532897159457, 0, 0.03347230702638626, 0.019984934478998184, 0.04077288135886192, 0.07049454003572464, 0.07588209211826324, 0, 0.23575858771800995, 0.3509331941604614, 0.4133082330226898, 0.0965750366449356079, 0.1391470581293106, 0.0425720252096653, 0, 0, 0.0106887686997652054, 2.6899847398453858e-06, 0.00014292488049250096, ) --- # `mod_BiomeE_PLULUC_primary_oac_yr251`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 251, 453, 2, 1, 6186.78271484375, 0.7524369359016418, 4.035921096801758, 0.24162381887435913, 7.232256889343262, 25.635595321655273, 0.0012793083442375064, 0.00014859484508633614, 1.21620070934295654, 0x1.ea3fa4p+1, 2.2883107662200928, 0.06006774306297302, 0.07175862789154053, 0.6511114239692688, 0.3887517750263214, 2.8879141807556152, 1.9910048246383667, 1.3824138641357422, 0.051908209919929504, 0.13415786623954773, 0.3467600345611572, 0.46717384457588195801, 1.608022689819336, 2.3995113372802734, 0.7914886474609375, 0.0259014256298542023, 0, 0.018108004704117775, 0.0011036914074793458, 0.09274822473526000977, - 251, 399, 2, 1, 194.831878662109375, 0.3017839789390564, 22.010501861572266, 0.4155859351158142, 16.8895263671875, 77.76274108886719, 0.03804957494139671, 0.0014232844114303589, 15.489456176757812, 48.78794860839844, 35.392906188964844, 0.7681367993354797, 1.150437831878662, 8.293951034545898, 4.9519758224487305, 142.9010467529297, 98.48064422607422, 19.416580200195312, 0.059250280261039734, 0.098708510398864746, 0.30878883600234985, 0.5332523584365845, 20.45547103881836, 31.54172706604004, 11.08625602722168, 0.2924974858760834, 0, 0.11326304078102112, 0.0039319987408816814, 0.6425342559814453, - 251, 405, 2, 1, 0x1.36af7p+4, 0.021548453718423843, 17.623119354248047, 0.3913283348083496, 15.112764358520508, 77.76273345947266, 0.024392450228333473, 0.00107125937938690186, 11.097250938415527, 34.95310592651367, 24.976856231689453, 0.5510115623474121, 0.8096410632133484, 5.942028045654297, 3.5477399826049805, 85.6981430053711, 59.06095886230469, 0x1.b9874p+3, 0.05867916718125343, 0.101414337754249573, 0.3117941617965698, 0.5281122922897339, 14.66521453857421875, 22.5409832000732422, 7.875769138336182, 0.21382656693458557, 0, 0.08398167043924332, 0.0001950404403032735, 0.02935912273824215, - 251, 451, 2, 2, 1437.6427001953125, 0.13790275156497955, 3.4452478885650635, 0.07297582924365997, 6.682096481323242, 25.635595321655273, 0x1.e8c408p-11, 3.907468635588884354e-05, 0x1.eb1ff8p-1, 1.5106961727142334, 0.331826776266098, 0.023750562220811844, 0.011593114584684372, 0.25681835412979126, 0.15333564579486847, 1.0321849584579468, 2.358306407928467, 0.350735068321228, 0.033053766936063766, 0.04586340859532356, 0.45660558342933655, 0.4644772708415985, 0.05835483968257904, 0.24708278477191925, 0.1887279450893402, 0.0007397927693091333, 0, 0.15239863097667694, 0.00092610338469967246, 0.090794317424297333, - 251, 433, 2, 2, 133.359130859375, 0.003309910651296377, 1.398947834968567, 0.0026108697056770325, 4.257976531982422, 22.621503829956055, 0.00015370674373116344, 5.731999408453703e-07, 0.24819529056549072, 0.08800467103719711, 0.000859237217810005, 0.006141125224530697, 0.02475515753030777, 0.0149607937783002853, 0.008719232864677906, 0.1298724114894867, 0.2967061698436737, 0.036946821957826614, 0.6700212955474854, 0.021222852170467377, 0.2592589855194092, 0.04949680715799332, 0.012063284404575825, 0.01976441591978073, 0.00770113151520490646, 0.00027562450850382447, 0, 0.2660006582736969, 3.218547863070853e-05, 0.00168809364549815655, - 251, 25, 2, 2, 38045.5390625, 0.12791907787322998, 0.3690004348754883, 0.0290364492684602737, 2.1868345737457275, 2.812093734741211, 1.069408517651027e-05, 1.6168050933629274e-06, 0.0336226224899292, 0.03630615770816803, 0.005750085227191448, 0.00188525731209665537, 0, 0.00617204699665308, 0.003685074858367443, 0.004184719640761614, 0.0157136470079422, 0.010590702295303345, 0, 0.3132511079311371, 0.36395764350891113, 0.32279127836227417, 0.00044997688382864, 0.006174805574119091, 0.005724828690290451, 0, 0, 0.35192495584487915, 0.0028658623341470957, 0x1.857094p-5, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 251, 453, 2, 1, 6204.3662109375, 0.781042218208313, 4.129751205444336, 0x1.f7454ep-3, 7.3158440589904785, 25.779739379882812, 0.0013394845882430673, 0.00015466718468815088, 1.2588590383529663, 3.964414358139038, 2.396291971206665, 0.06221679598093033, 0.07521170377731323, 0.6739504337310791, 0.4023880362510681, 3.0446815490722656, 2.099076271057129, 1.4398750066757202, 0.05223488435149193, 0.13310246169567108, 0.3445485532283783, 0.4701140820980072, 1.6745383739471436, 2.48441481590271, 0.8098765015602112, 0.02681770920753479, 0, 0.018392393365502357, 0.00116771424654871225, 0.09918257594108582, + 251, 397, 2, 1, 149.41921997070312, 0.24800805747509003, 23.04864501953125, 0.424426794052124, 17.283241271972656, 79.71361541748047, 0.041723497211933136, 0.00152247771620750427, 16.59813690185547, 52.280128479003906, 38.35758590698242, 0.8215985894203186, 1.2478489875793457, 8.887621879577637, 5.306432247161865, 158.8809356689453, 109.49272918701172, 20.950157165527344, 0.05956275016069412, 0.0977684110403060913, 0.30660390853881836, 0.5360649228096008, 22.047210693359375, 33.81137466430664, 11.764163970947266, 0.3125823736190796, 0, 0.12065424770116806, 0.0034908705856651068, 0.5808157920837402, + 251, 405, 2, 1, 53.251808166503906, 0.04820876568555832, 15.386279106140137, 0x1.85289cp-2, 14.12112522125244140625, 79.71360778808594, 0.018593326210975647, 0.00090715847909450531, 9.05298137664795, 28.51395606994629, 20.331798553466797, 0.44778183102607727, 0.6580069065093994, 4.847372531890869, 2.8941659927368164, 62.71681594848633, 43.22386169433594, 11.25114822387695312, 0.058483533561229706, 0.102879956364631653, 0.312284916639328, 0.5263516306877136, 12.039875030517578, 18.3539142608642578125, 6.3140387535095215, 0.17407317459583282, 0, 0.07035320997238159, 0.00035183815634809434, 0.05045400932431221, + 251, 451, 2, 2, 1829.4735107421875, 0.16942362487316132, 3.365407943725586, 0.06579309701919556, 6.604217052459717, 25.779739379882812, 0.0008895396604202688, 3.444071626290679e-05, 0.9260785579681396, 1.4584969282150269, 0.28346580266952515, 0.02300185151398182, 0.013700224459171295, 0.24794448912143707, 0.14803743362426758, 0.97800147533416748, 2.234492063522339, 0.3307599723339081, 0.04142044112086296, 0.05487056449055672, 0.4725307822227478, 0.431178182363510132, 0.06103000044822693, 0.2366011142730713, 0.17557111382484436, 0.001471759751439094543, 0, 0.1553182750940323, 0.0011602576123550534, 0.11097906529903412, + 251, 25, 2, 2, 38396.28515625, 0.129136696457862854, 0.36907342076301575, 0.02906501665711403, 2.1870508193969727, 2.8104193210601807, 1.069831705535762e-05, 1.618665010028053e-06, 0.03363259881734848, 0.036316920071840286, 0.005760264582931995, 0.00188537896610796452, 0, 0.006173876579850912, 0.003686167299747467, 0.00418661767616868, 0.015720801427960396, 0.0105964895337820053, 0, 0.31301701068878174, 0.3639802634716034, 0.32300275564193726, 0.0004636230878531933, 0.00615537166595459, 0.0056917485781013966, 0, 0, 0.35191845893859863, 0.002892508404329419, 0.04800635203719139, ) --- @@ -229,53 +227,52 @@ # `mod_BiomeE_PLULUC_secondary_odt_yr251`: tibble::tribble( - ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, - 251, 1, 273.5336608886719, 1.436545491218567, 799.9600830078125, 0, 0.03994165733456611633, 1.3665517568588257, 19.960058212280273, 179.99998474121094, 600, 3.4922304153442383, 0.00221638148650527, 0.0022776273544877768, 6.124591891421005e-05, 0.001460356987081468, 2.1430466175079346, 0.0019968198612332344, 0.5936791896820068, 0.360928475856781, 4.567685604095459, 3.3516945838928223, 0.06135213375091553, 9.98409595922567e-05, 0.010214830748736858, 0.009023194201290607, 0.0130505301058292389, 0.0095762629061937332, 0.1630200296640396, 2.195016860961914, 72.7654800415039, 0.01630200259387493, 0x1.d20d94p-4, 0.6753337383270264, 0.0023247948847711086, 0, - 251, 2, 271.50848388671875, 2.0038182735443115, 799.958984375, 0, 0.041029609739780426, 0x1.f6c0a8p+0, 19.95897102355957, 179.99998474121094, 600, 3.498730182647705, -0.0001232381910085678, 0.0022454645950347185, 0.0023687027860432863, 0.00145139999222010374, 2.1382832527160645, 0.0021789604797959328, 0.5947842001914978, 0.3608585596084595, 4.553340435028076, 3.3679401874542236, 0.061425648629665375, 0.00010894798469962552, 0.010233843699097633362, 0.009021446108818054, 0.013009545393288136, 0.009622680023312569, 0.16302265226840973, 2.1955599784851074, 72.76500701904297, 0.016302265226840973, 0.11379374563694, 0.6753363609313965, 0.002216765657067299, 0.00014074434875510633, - 251, 180, 290.3451843261719, 2.415818214416504, 799.5160522460938, 0, 0x1.ef914p-2, 0x1.be2cb8p+0, 19.516048431396484, 179.99998474121094, 600, 3.61742901802063, 0.006934002041816711, 0.009365891106426716, 0.0024318890646100044, 0.005741392262279987, 2.130375862121582, 0.032900892198085785, 0.6149629950523376, 0.36590737104415894, 4.69936466217041, 3.5189905166625977, 0.06265977025032043, 0.001645044540055096149, 0.01058103982359171, 0.00914766639471054, 0x1.b7f7cap-7, 0.01005425676703453, 0.16411571204662323, 2.2025346755981445, 72.58418273925781, 0.016411570832133293, 0.1133508756756782532, 0.6756303310394287, 0.0015275912592187524, 0, - 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.04862569645047188, 1.9935002326965332, 19.95137596130371, 179.99998474121094, 600, 3.7430531978607178, 0.0004923702217638493, 0.002466986421495676, 0.0019746161997318268, 0.0014152370858937502, 2.230585813522339, 0.06998429447412491, 0.6363189816474915, 0.3799172639846802, 4.901163101196289, 3.666429281234741, 0.06394664943218231, 0.003499215468764305, 0.01094849407672882, 0.009497915394604206, 0.014003322459757328, 0.010475507006049156, 0.16300234198570251, 2.03177762031555176, 72.16448211669922, 0.01630023494362831, 0.107103407382965088, 0.6754701137542725, 0.0022649618331342936, 6.5889589677681215e-06, - 251, 365, 273.3876037597656, 1.826090812683105469, 799.9300537109375, 0, 0.06998021900653839, 1.7774653434753418, 19.93001937866211, 179.99998474121094, 600, 3.743769645690918, 0.00047632865607738495, 0.0024606601800769567, 0.001984331523999572, 0.001413878402672708, 2.2272231578826904, 0.07018160074949265, 0.6364409327507019, 0.379989892244339, 4.902232646942139, 3.6671996116638184, 0.06389021873474121, 0.0035090805031359196, 0.010950589552521706, 0.00949972961097955703735, 0.01400637812912464142, 0.010477707721292973, 0.1629989892244339, 2.0324301719665527, 72.16403198242188, 0.01629989966750145, 0.1071168184280395508, 0.6754730343818665, 0.0022981821093708277, 0, + ~year, ~doy, ~Tk, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~ws1, ~ws2, ~ws3, ~LAI, ~NPP, ~GPP, ~Rauto, ~Rh, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_uptk, + 251, 1, 273.5336608886719, 1.436545491218567, 799.9601440429688, 0, 0.03989458084106445, 1.366621732711792, 19.9601058959960938, 179.99998474121094, 600, 3.545769453048706, 0.0022412477992475033, 0.0022878830786794424, 4.66351630166173e-05, 0.00147393031511455774, 2.163930892944336, 0.002506411634385586, 0.6027808785438538, 0.36641770601272583, 4.457956314086914, 3.3131895065307617, 0.062141403555870056, 0.0001253205700777471, 0.010371451266109943, 0.00916041713207960129, 0x1.a15dd8p-7, 0.009466256015002728, 0.16449543833732605, 2.211317300796509, 73.53285217285156, 0.016449544578790665, 0.1148822084069252, 0.6806582808494568, 0.0021874436642974615, 0, + 251, 2, 271.50848388671875, 2.0038182735443115, 799.9590454101562, 0, 0.040993303060531616, 1.963923454284668, 19.959009170532227, 179.99998474121094, 600, 3.5523083209991455, -0.00011776015162467957, 0.0022555748000741005, 0.00237333495169878, 0.0014648946234956384, 2.159140110015869, 0.002689437475055456, 0.6038923859596252, 0.36633068323135376, 4.442195415496826, 3.330871105194092, 0.06224021315574646, 0.000134471862111240625, 0.0103905769065022469, 0.009158243425190449, 0.012691986747086048, 0.00951677281409502, 0.16449794173240662, 2.211873769760132, 73.5323715209961, 0.01644979417324066, 0.11489368975162506, 0.6806609630584717, 0.002055014483630657, 0.000166371450177393854, + 251, 180, 290.3451843261719, 2.415818214416504, 799.5171508789062, 0, 0.482876718044281, 1.7443971633911133, 19.51712417602539, 179.99998474121094, 600, 3.668417453765869, 0.007000985089689493, 0.0094047486782073975, 0.0024037635885179043, 0.0057961586862802505, 2.153475761413574, 0.03359071537852287, 0.623630940914154, 0.3711283206939697, 4.586367130279541, 3.486979722976684570312, 0.06335856020450592, 0.0016795361880213022, 0.0107302041724324226, 0x1.300712p-7, 0.013103906065225601196, 0.0099627990275621414, 0.16556814312934875, 2.220280170440674, 73.34941101074219, 0.016556814312934875, 0.1144527941942215, 0.6809604167938232, 0.0015705771511420608, 0, + 251, 364, 271.62640380859375, 2.0575454235076904, 799.951416015625, 0, 0.0485725626349449158, 1.9935612678527832, 19.95142936706543, 179.99998474121094, 600, 3.797483205795288, 0.0004929371643811464, 0.00247697136364877224, 0.001984034199267626, 0.0014291867846623063, 2.2494161128997803, 0.0709228515625, 0.6455721259117126, 0.3854444921016693, 4.789842128753662, 3.6361520290374755859, 0.06474842876195908, 0.00354614434763789177, 0.011107728816568851, 0.009636097587645054, 0.013685262762010098, 0.010389002040028572, 0.1644166111946106, 2.04951548576355, 72.9272232055664, 0.01644166186451912, 0x1.baf868p-4, 0.6808094382286072, 0.002249078592285514, 0, + 251, 365, 273.3876037597656, 1.826090812683105469, 799.9301147460938, 0, 0.06991278380155563, 1.7775189876556396, 19.9300861358642578125, 179.99998474121094, 600, 0x1.e62be6p+1, 0.00047946441918611526, 0.002470617648214102, 0.0019911532290279865, 0.0014278182061389089, 2.24601149559021, 0.07112147659063339, 0.6456964612007141, 0.38551875948905945, 4.790919303894043, 3.636930465698242, 0.06484106183052063, 0.0035560750402510166, 0.011109867133200169, 0.0096379537135362625, 0.013688340783119202, 0.010391226038336754, 0.1644132137298584, 2.0501813888549805, 72.92676544189453, 0.01644132100045681, 0.10816074162721634, 0.680812418460846, 0.002132832771167159, 0.00014981080312281847, ) --- # `mod_BiomeE_PLULUC_secondary_oat`: tibble::tribble( - ~year, ~CAI, ~LAI, ~Density, ~DBH, ~Density12, ~DBH12, ~QMD12, ~NPP, ~GPP, ~Rauto, ~Rh, ~Prcp, ~SoilWater, ~Transp, ~Evap, ~Runoff, ~plantC, ~soilC, ~totC, ~plantN, ~soilN, ~totN, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~seedN, ~leafN, ~rootN, ~sapwoodN, ~heartwoodN, ~mcrbC, ~fastSOM, ~slowSOM, ~mcrbN, ~fastSoilN, ~slowSoilN, ~mineralN, ~N_fxed, ~N_uptk, ~N_yrMin, ~N_P2S, ~N_loss, ~totseedC, ~totseedN, ~Seedling_C, ~Seedling_N, ~MaxAge, ~MaxVolume, ~MaxDBH, ~NPPL, ~NPPW, ~n_deadtrees, ~c_deadtrees, ~m_turnover, ~c_turnover_time, ~lu_fraction, - 1, 0.00416006101295352, 0.00620648916810751, 500, 0.675085723400116, 0, 0, 0, 0.00230823061428964138, 0.004436021205037832, 0.002127790590748191, 0.003694182261824608, 587.5296630859375, 799.9039306640625, 0, 159.69207763671875, 427.9336853027344, 0.009901872836053371, 0.01386601198464632, 0.023767884820699692, 0.00028317642863839865, 0.00407501682639122, 0.004358193371444941, 0.004225173033773899, 0, 0.001055103144608438, 0.0006299585802480578, 0.001152654062025249, 0.0028389838989824057, 0.00023786879319231957, 0, 1.8153990822611377e-05, 1.5748948499094695e-05, 3.2932978228927823e-06, 8.111390343401581e-06, 0.000366281339665874839, 0.012364452704787254, 0.0011352773290127516, 3.6628134694183245e-05, 0.000793115294072777, 2.6989993784809485e-05, 0.0032182831782847643, 0, 0, -0.0117817027494311333, 2.004480666073505e-05, 0.02192673645913601, 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0.0022750776261091232, 0.000113753914774861187, 0.0022750776261091232, 0.000113753907498903573, 9.000265121459961, 0.001954109640792012, 0.017596757039427757, 0.0028416116256266832, 0.006880678236484528, 1.5750470993225463e-05, 0.000916304241400212, 0.000916304241400212, 1.9599542617797852, 0.4000000059604645, + 16, 0.04833274334669113, 0.14704228937625885, 2009.9169921875, 1.1782575845718384, 0, 0, 0, 0.06215196475386619567871, 0.09093406051397324, 0.02878209576010704, 0.012196685187518597, 587.5296630859375, 799.90673828125, 0, 153.25502014160156, 434.2740173339844, 0.2517127990722656, 0.08069731295108795, 0.3324100971221924, 0.003704541362822056, 0.005149995908141136, 0.008854537270963192, 0.07830988615751266, 0.004114205949008465, 0.02499719336628914, 0.01492479443550109863281, 0.0758480355143547, 0.053518690168857574, 0.002325991867110133, 0.0002057102246908471, 0.00043010085937567055, 0.0003731192264240235, 0.00021670872229151428, 0.000152910390170291066, 0.002262876834720373, 0.04377659782767296, 0.03465784341096878, 0.00022628768056165427, 0.0019180658273398876, 0.00043470165110193193, 0.002570941112935543, 0, 0.0010557769564911723, 0.0010267195757478476, 0.0005489086033776402, 0.0091457869857549667, 0x1.ddc81ap-9, 0.00018225915846414864, 0x1.ddc81ap-9, 0.00018225915846414864, 16.00072479248047, 0.007513242773711681, 0.031602952629327774, 0.008355258964002132, 0.021820859983563423, 5.3695941460318863e-05, 0.0037389725912362337, 0.0037389725912362337, 2.452638864517212, 0.4000000059604645, + 251, 1.37581837177276611, 3.798945426940918, 46632.796875, 1.0767889022827148, 202.671966552734375, 21.035327911376953, 21.303951263427734, 1.445432186126709, 2.2112863063812256, 0.7658540606498718, 1.3433226346969604, 587.5296630859375, 799.9301147460938, 0, 94.1740951538086, 493.3553466796875, 0x1.78c94p+3, 75.14299774169922, 86.91756439208984, 0.113186568021774292, 0.8075852394104004, 0.92077183723449707, 2.2421300411224365, 0.0713198110461235, 0.645820677280426, 0.3855929076671600342, 4.791996479034424, 3.63770627975463867, 0.06478390842676163, 0.003565991995856166, 0.01111200638115406, 0.009639809839427471, 0.013691418804228306, 0.0103934435173869132996, 0.1644132137298584, 2.0514917373657227, 72.92709350585938, 0.01644132100045681, 0.108194142580032349, 0.6808169484138489, 0.002132832771167159, 0, 0.02256692387163639, 0.022546617314219475, 0.022442059591412544, 0.007400314789265394, 0.0654589831829071, 0.0032729506492614746, 0.0654589831829071, 0.0032729506492614746, 79.713623046875, 0.7253342270851135, 0.2304864525794983, 0.17173214256763458, 0.6585536003112793, 0.0090598659589886665, 0.8894374966621399, 0.8894374966621399, 5.523781776428223, 0.4000000059604645, ) --- # `mod_BiomeE_PLULUC_secondary_oac_yr1`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 1, 1, 2, 1, 500, 0.00416006101295352, 0.675085723400116, 0.12427009642124176, 2.9578895568847656, 1.0000004768371582, 3.5793796996586025e-05, 1.19649812404531986e-05, 0.08320121467113495, 0.1241297796368599, 0.08450345695018768, 0.004757375922054052, 0, 0.021102063357830048, 0.01259917113929987, 0.023053081706166267, 0.05677967518568039, 0.07819932699203491, 0, 0.3117108643054962, 0.30679261684417725, 0.3814965486526489, 0.046164609491825104, 0.0887204185128212, 0.042555809020996094, 0, 0, 0.01055467501282692, 2.98883514915360138e-06, 0.00010451104026287794, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 1, 1, 2, 1, 500, 0.00416250666603446, 0.6753503084182739, 0.12453463673591614, 2.9584689140319824, 1.0000004768371582, 3.582185672712512e-05, 1.19930409709922969e-05, 0.08325012773275375, 0.12420248240232468, 0.08486519008874893, 0.004756688140332699, 0, 0.021114422008395195, 0.012606550008058548, 0.0230738222599029541, 0.05683089420199394, 0.07829460501670837, 0, 0.31149959564208984, 0.30654868483543396, 0.3819516897201538, 0.04662158340215683, 0.08874092996120453, 0.0421193465590477, 0, 0, 0.01055500097572803497, 2.988882670251769e-06, 0.00010475356975803152, ) --- # `mod_BiomeE_PLULUC_secondary_oac_yr2`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 2, 1, 2, 1, 494.7226867675781, 0.005102669820189476, 0.7790457010269165, 0.103959955275058746, 3.177488327026367, 0x1.fffea4p+0, 4.766677739098668e-05, 1.1872980394400656e-05, 0.10314202308654785156, 0.196566283702850342, 0.1047508642077446, 0.00369688356295228, 0, 0.0334162674844265, 0.0199514739215374, 0.04066816717386246, 0.07031325995922089, 0.07557028532028198, 0, 0.2360706627368927, 0.3517475426197052, 0.4121817350387573, 0.0958176702260971, 0.1389899104833603, 0.043172240257263184, 0, 0, 0.010687612928450108, 2.6900818284048e-06, 0.0001422840723535046, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 2, 1, 2, 1, 494.7225036621094, 0.005111239850521088, 0.7799178957939148, 0.104567594826221466, 3.1792666912078857, 0x1.fffea4p+0, 4.777356298291124403e-05, 1.19517062557861209e-05, 0.10331528633832932, 0.19689592719078064, 0.10555817931890488, 0.003693532897159457, 0, 0.03347230702638626, 0.019984934478998184, 0.04077288135886192, 0.07049454003572464, 0.07588209211826324, 0, 0.23575858771800995, 0.3509331941604614, 0.4133082330226898, 0.0965750366449356079, 0.1391470581293106, 0.0425720252096653, 0, 0, 0.0106887686997652054, 2.6899847398453858e-06, 0.00014292488049250096, ) --- # `mod_BiomeE_PLULUC_secondary_oac_yr251`: tibble::tribble( - ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, - 251, 453, 2, 1, 6186.7998046875, 0.7524390816688538, 4.035921096801758, 0.24162381887435913, 7.232256889343262, 0x1.9a2b7p+4, 0.0012793083442375064, 0.00014859484508633614, 1.21620070934295654, 0x1.ea3fa4p+1, 2.2883107662200928, 0.06011528894305229, 0.07175862789154053, 0.6511114239692688, 0.3887517750263214, 2.8879141807556152, 1.9910048246383667, 1.3824138641357422, 0.051908209919929504, 0.13415786623954773, 0.3467600345611572, 0.46717384457588195801, 1.608022689819336, 2.3995113372802734, 0.7914886474609375, 0.025879424065351486206, 0, 0.018108004704117775, 0.0011042271507903934, 0.0927484780550003, - 251, 399, 2, 1, 194.8302459716797, 0.30178210139274597, 22.010534286499023, 0.4155844449996948, 16.889537811279297, 77.76274871826172, 0.03804968297481537, 0.0014232806861400604, 15.4894895553588867, 48.78805160522461, 35.39298629760742, 0.7651626467704773, 1.1504395008087158, 8.29396915435791, 4.951986312866211, 142.90150451660156, 98.480964660644531, 19.416606903076172, 0.05925028398633003, 0.0987086370587349, 0.30878883600234985, 0.5332521796226501, 0x1.4749d4p+4, 31.541793823242188, 11.086270332336426, 0.2897169291973114, 0, 0.113263264298439026, 0.003925415687263012, 0.6425321102142334, - 251, 405, 2, 1, 19.417705535888672, 0.021548375487327576, 17.623151779174805, 0.3913313150405884, 15.112777709960938, 77.76274871826172, 0.024392541497945786, 0.001071268692612648, 11.097282409667969, 34.95320129394531, 24.976898193359375, 0.5505040287971497, 0.8096428513526917, 5.942044258117676, 3.5477497577667236, 85.69849395751953, 59.06119918823242, 13.797794342041016, 0.05867915228009224, 0.10141456872224808, 0.3117940425872803, 0.5281122326850891, 14.66525650024414, 22.5410480499267578, 7.875792026519775, 0.21213756501674652, 0, 0.08398187905550003, 0.00019495734886731952, 0.029359113425016403, - 251, 451, 2, 2, 1437.67138671875, 0.13790462911128998, 3.4452333450317383, 0.07297545671463013, 6.682082176208496, 25.63560676574707, 0.0009322388214059174, 3.907427890226245e-05, 0.9592221975326538, 1.5106867551803589, 0.33182018995285034, 0x1.84ac84p-6, 0.0115934060886502266, 0.2568167448043823, 0.15333469212055206, 1.032175064086914, 2.358283519744873, 0.3507319688796997, 0.033054888248443604, 0.04586457833647728, 0.45660725235939026, 0.46447324752807617, 0.05835498869419098, 0.2470809370279312, 0.18872594833374023, 0.0007063770317472517, 0, 0.15239913761615753, 0x1.e53c54p-11, 0.09079550951719284, - 251, 433, 2, 2, 133.34364318847656, 0.0033094040118157864, 1.3989133834838867, 0.0026102177798748016, 4.2579240798950195, 22.621519088745117, 0.0001536991767352447, 5.730398697778583e-07, 0.2481861263513565, 0.08799765259027481, 0.00085917126853019, 0.006143683101981878, 0.024753274396061897, 0.014959601685404778, 0.008718542754650116, 0.1298651099205017, 0.2966892719268799, 0.03694399446249008, 0.6700215935707092, 0.0212236475199461, 0.2592580020427704, 0.04949674382805824, 0.012062335386872292, 0.019762881100177765, 0.007700545247644186, 0.0002777866320684552, 0, 0.266003280878067, 3.2190415367949754e-05, 0.0016878147143870592, - 251, 25, 2, 2, 38045.53125, 0.1279190629720688, 0.3690004348754883, 0.02903642505407333374, 2.1868345737457275, 2.812094211578369, 1.069408517651027e-05, 1.6168041838682257e-06, 0.0336226224899292, 0.03630615770816803, 0.005750082433223724, 0.001885257544927299, 0, 0.00617204699665308, 0.003685074858367443, 0.004184719640761614, 0.0157136470079422, 0.010590700432658195, 0, 0.3132510483264923, 0.363957792520523071, 0.3227911591529846, 0.0004499782808125019, 0.006174805574119091, 0.005724827293306589, 0, 0, 0.35192495584487915, 0.0028658623341470957, 0.04753902181982994, + ~year, ~cID, ~PFT, ~layer, ~density, ~flayer, ~DBH, ~dDBH, ~height, ~age, ~BA, ~dBA, ~Acrown, ~Aleaf, ~NSC, ~seedC, ~leafC, ~rootC, ~sapwoodC, ~heartwoodC, ~NSN, ~treeG, ~fseed, ~fleaf, ~froot, ~fwood, ~NPP, ~GPP, ~Rauto, ~N_uptk, ~N_fxed, ~deathrate, ~n_deadtrees, ~c_deadtrees, + 251, 453, 2, 1, 6204.3603515625, 0.7810415029525757, 4.129751205444336, 0x1.f7454ep-3, 7.3158440589904785, 0x1.9c79d4p+4, 0.0013394845882430673, 0.00015466718468815088, 1.2588590383529663, 3.964414358139038, 2.396291971206665, 0.06240111216902733, 0.07521174848079681, 0.6739504337310791, 0.4023880362510681, 3.0446815490722656, 2.099076271057129, 1.4398752450942993164, 0.05223490670323372, 0.1331024169921875, 0.34454840421676636, 0.47011426091194153, 1.6745381355285645, 2.48441481590271, 0.8098766207695007, 0.026983819901943207, 0, 0.018392393365502357, 0.0011698165908455849, 0.09918248653411865234, + 251, 397, 2, 1, 149.4190673828125, 0.24800780415534973, 23.04864501953125, 0.424426794052124, 17.283241271972656, 79.71361541748047, 0.041723497211933136, 0.00152247771620750427, 16.59813690185547, 52.280128479003906, 38.35758590698242, 0.8203319907188416, 1.2478489875793457, 8.887621879577637, 5.306432247161865, 158.8809356689453, 109.49272918701172, 20.950157165527344, 0.05956275016069412, 0.0977684110403060913, 0.30660390853881836, 0.5360649228096008, 22.047210693359375, 33.81137466430664, 11.764163970947266, 0.3118915557861328, 0, 0.12065424770116806, 0.0034885844215750694, 0.5808152556419373, + 251, 405, 2, 1, 53.25290298461914, 0.04820975288748741, 15.386279106140137, 0x1.85289cp-2, 14.12112522125244140625, 79.713623046875, 0.018593326210975647, 0.00090715847909450531, 9.05298137664795, 28.51395606994629, 20.331804275512695, 0.447465121746063232, 0.658007025718689, 4.847372531890869, 2.8941659927368164, 62.71681594848633, 43.22385787963867, 11.25114917755127, 0.0584835410118103, 0.10287997126579285, 0.3122848868370056, 0.5263516306877136, 12.039875030517578, 18.3539142608642578125, 6.3140387535095215, 0.17348730564117432, 0, 0.07035320997238159, 0.0003517267759889364, 0.05045504495501518, + 251, 451, 2, 2, 1829.462158203125, 0.16942259669303894, 3.365408182144165, 0.06579309701919556, 6.604217529296875, 0x1.9c79d4p+4, 0.0008895398350432515, 3.4440658055245876e-05, 0.9260786771774292, 1.4584969282150269, 0.2834637463092804, 0.02289552241563797, 0.013700264506042004, 0.24794448912143707, 0.14803743362426758, 0.97800147533416748, 2.234492301940918, 0.33076006174087524, 0.041420552879571915, 0.0548718124628067, 0.4725313782691955566, 0.43117621541023254, 0.06103000044822693, 0.23660095036029816, 0.17557094991207123, 0.0013176801148802042, 0, 0.1553182750940323, 0.0011572293005883694, 0.11097833514213562, + 251, 25, 2, 2, 38396.30078125, 0.12913672626018524, 0.36907342076301575, 0.02906501665711403, 2.1870508193969727, 2.8104190826416016, 1.069831705535762e-05, 1.618665010028053e-06, 0.03363259881734848, 0.036316920071840286, 0.005760271102190018, 0.001885378616861999, 0, 0.006173876579850912, 0.003686167299747467, 0.00418661767616868, 0.015720801427960396, 0.01059649046510458, 0, 0.3130168914794922, 0.36398011445999146, 0.32300296425819397, 0.0004636221565306186676, 0.006155370734632015, 0.0056917485781013966, 0, 0, 0.35191845893859863, 0.0028925088699907064, 0.04800637438893318, ) diff --git a/tests/testthat/_snaps/model-runs.md b/tests/testthat/_snaps/model-runs.md index a14c5dbf..1ab8f508 100644 --- a/tests/testthat/_snaps/model-runs.md +++ b/tests/testthat/_snaps/model-runs.md @@ -2,133 +2,133 @@ # `mod_pmodel_bysite`: tibble::tribble( - ~date, ~year_dec, ~fapar, ~gpp, ~aet, ~le, ~pet, ~vcmax, ~jmax, ~vcmax25, ~jmax25, ~gs_accl, ~wscal, ~chi, ~iwue, ~rd, ~tsoil, ~netrad, ~wcont, ~snow, ~cond, - as.Date("2007-01-01"), 2007, 0.6048851013183594, 1.62167179584503174, 1.2401200532913208, 5478238.5, 1.2401202917099, 9.353630048281047e-06, 3.0402659831452183e-05, 3.575173468561843e-05, 7.973336323630065e-05, 0.0017184922471642494, 0.4594873785972595, 0.6306195259094238, 8.86561902007088e-05, 0.08976203948259354, 8.61430835723877, -13.9936399459838867, 198.6708526611328, 0, 1.2579176425933838, - as.Date("2007-01-02"), 2007.003, 0.6025077104568481, 2.915337562561035, 1.183174729347229, 5461327.5, 1.183174967765808, 8.18862008600263e-06, 2.7402431442169473e-05, 3.581396958907135e-05, 7.990489393705502e-05, 0.001719580264762044, 0.46096885204315186, 0.6308248043060303, 8.860692469170317e-05, 0.07720886170864105, 8.53307056427002, -15.210162162780762, 199.3114013671875, 0, 1.22373485565185547, - as.Date("2007-01-03"), 2007.005, 0.6002227067947388, 2.838341474533081, 1.2208484411239624, 5525246, 1.2208484411239624, 8.68311235535657e-06, 2.869185118470341e-05, 3.580346310627647e-05, 7.984393596416339e-05, 0.0017150031635537744, 0.46100711822509766, 0.6301504969596863, 8.876876381691545e-05, 0.08212575316429138, 8.449606895446777, -14.063773155212402, 199.3279571533203, 0, 1.2374159097671509, - as.Date("2007-01-04"), 2007.008, 0.5980722308158875, 1.2497811317443848, 1.26889503002166748, 5600239, 1.268894910812378, 9.194688573188614e-06, 2.9869213904021308e-05, 3.5041106457356364e-05, 7.815592107363045e-05, 0.0017207317287102342, 0.460974633693695068359, 0.6314460039138794, 8.845783304423094e-05, 0.08726193755865097, 8.397799491882324, -12.656678199768066, 199.31390380859375, 0, 1.2548316717147827, - as.Date("2007-01-05"), 2007.011, 0.5959953665733337, 2.7435781955718994, 1.303849458694458, 5667106, 1.3038495779037476, 9.630125532567035e-06, 3.091002145083621e-05, 3.490726157906465e-05, 7.780997111694887e-05, 0.0017211453523486853, 0.4608839154243469, 0.631892740726471, 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as.Date("2012-12-14"), 2012.951, 0.6119469404220581, 0.1761210411787033, 1.1302703619003296, 5323232.5, 1.1302708387374878, 6.079429567762418e-06, 2.0955116269760765e-05, 2.2806701963418163e-05, 5.534786032512784e-05, 0.0018988935044035316, 0.9104744791984558, 0.6712299585342407, 8.097208774415776e-05, 0.0467480793595314, 9.86552906036377, -17.13620948791504, 393.6664123535156, 0, 1.2114062309265137, + as.Date("2012-12-15"), 2012.954, 0.6121950745582581, 2.4887099266052246, 1.2860232591629028, 5433393, 1.2860231399536133, 8.442957550869323e-06, 2.6770207114168443e-05, 2.27512246055994183e-05, 5.5166299716802314e-05, 0.0019081267528235912, 0.9109541177749634, 0.6728540062904358, 8.057210652623326e-05, 0.06768963485956192, 9.81483268737793, -13.335578918457031, 393.873779296875, 0, 1.29336464405059814, + as.Date("2012-12-16"), 2012.956, 0.6125892996788025, 2.496405601501465, 1.2910796403884888, 5420555, 1.2910794019699097, 8.590437573730014e-06, 2.7068394047091715e-05, 2.270466211484745e-05, 5.493685603141785e-05, 0.0019041639752686024, 0.9114340543746948, 0.6725848317146301, 8.063839050009847e-05, 0.0691603422164917, 9.8307466506958, -13.3113479614257812, 394.081298828125, 0, 1.2985997200012207, + as.Date("2012-12-17"), 2012.959, 0.6131243705749512, 2.279857635498047, 1.2161520719528198, 5343127.5, 1.2161521911621094, 0x1.f12dacp-18, 2.4221484636655077e-05, 2.26390457100933418e-05, 5.478446837514639e-05, 0.001903023337945342, 0.913399875164032, 0.6723995208740234, 8.068402530625463e-05, 0.05871384218335152, 9.807706832885742, -0x1.e9adcp+3, 394.9312744140625, 0, 1.2661315202713013, + as.Date("2012-12-18"), 2012.962, 0.6137993931770325, 1.983205914497375488, 1.2197253704071045, 5334423, 1.2197257280349731, 0x1.f4f60ap-18, 2.429929554637056e-05, 2.248884629807435e-05, 5.437946310848929e-05, 0.00189328461419790983, 0.9144412875175476, 0.6709882616996765, 8.10316123533994e-05, 0.05932433158159256, 9.77748966217041, -0x1.e92734p+3, 395.3815612792969, 0, 1.270019769668579, + as.Date("2012-12-19"), 2012.964, 0.6146137714385986, 1.009801983833313, 1.015608310699463, 5153266, 1.01560819149017334, 4.816291038878262e-06, 1.7494221538072452e-05, 2.2166874259710312e-05, 5.394020990934223e-05, 0.0019002702319994569, 0x1.d45c66p-1, 0.6711893677711487, 8.098207763396204e-05, 0.03609207272529602, 9.567461967468262, -20.5892333984375, 395.5225830078125, 0, 1.1566267013549805, + as.Date("2012-12-20"), 2012.967, 0.6155468821525574, 0.28179067373275757, 1.086504578590393, 5207059, 1.086504578590393, 5.501835858012782e-06, 1.9253175196354277e-05, 2.1573910998995416e-05, 5.275720468489453e-05, 0.0019180537201464176, 0.9275217652320862, 0.6733303666114807, 8.045477443374693e-05, 0.042051542550325394, 9.424203872680664, -18.79631996154785, 401.0372314453125, 0, 1.2011693716049194, + as.Date("2012-12-21"), 2012.97, 0.6165912747383118, 0.805321991443634, 1.13539457321167, 5244824, 1.13539457321167, 5.995933406666154e-06, 2.0480692910496145e-05, 2.11207097891019657e-05, 5.1833823818014935e-05, 0.0019380798330530524, 0.9314401745796204, 0.6760126948356628, 7.979413931025192e-05, 0.04647841677069664, 9.362638473510742, -17.5637264251709, 402.7314453125, 0, 1.2296150922775269, + as.Date("2012-12-22"), 2012.973, 0.6177390813827515, 0.94290667772293091, 1.173363447189331, 5276138, 1.1733629703521729, 6.370918981701834e-06, 2.135698014171794e-05, 2.070627670036629e-05, 0x1.aaf7dcp-15, 0.0019472434651106596, 0.9316177368164062, 0.6773180365562439, 7.947266567498446e-05, 0.049962252378463745, 9.248202323913574, -16.59670639038086, 402.8082275390625, 0, 1.250138759613037, + as.Date("2012-12-23"), 2012.975, 0.6166164875030518, 2.65600323677063, 1.3014453649520874, 5386441.5, 1.3014451265335083, 8.279812391265295e-06, 2.5990761059802026e-05, 2.0744686480611563e-05, 5.0878512411145493e-05, 0.0019540756475180387, 0.9316391944885254, 0.6787950396537781, 7.910889689810574e-05, 0.06704994291067123, 9.27518081665039, -13.309120178222656, 402.8175048828125, 0, 1.3107279539108276, + as.Date("2012-12-24"), 2012.978, 0.6156184673309326, 0.22910700738430023, 1.1216955184936523, 5239659, 1.121695637702942, 5.540571237361291e-06, 1.9138311472488567e-05, 2.0153836885583587e-05, 4.962978709954768419e-05, 0.0019751349464058876, 0.9364942908287048, 0.6814975738525391, 7.844329229556024e-05, 0.04268554970622063, 9.127959251403809, -17.877843856811523, 404.9167175292969, 0, 1.2209092378616333, + as.Date("2012-12-25"), 2012.981, 0.6147447228431702, 0.15789510309696198, 1.2066398859024048, 5318798, 1.2066398859024048, 6.3745906118128914e-06, 2.113671507686376572e-05, 1.9508941477397457e-05, 4.813290433958173e-05, 0.0020005947444587946, 0.942179024219512939453, 0.6851096153259277, 7.755369006190449e-05, 0.05015427991747856, 9.063678741455078, -15.658535957336426, 407.3746643066406, 0, 1.2645734548568726, + as.Date("2012-12-26"), 2012.984, 0.6141701340675354, 2.65700101852417, 1.2310097217559814, 5349710.5, 1.2310097217559814, 6.704882252961397e-06, 2.197449248342309e-05, 1.964473085536156e-05, 4.84127776871901e-05, 0.001992850797250867, 0.942280113697052, 0.6842092275619507, 7.777543942211196e-05, 0.053019069135189056, 9.033257484436035, -14.974623680114746, 407.4183654785156, 0, 1.27470695972442627, + as.Date("2012-12-27"), 2012.986, 0.6137244701385498, 1.2473502159118652, 1.26701653003692627, 5393142, 1.2670164108276367, 7.038022886263207e-06, 2.268689968332182616e-05, 1.9328577764099464e-05, 4.75779379485175e-05, 0.001996374921873212, 0.94233173131942749, 0.6850154399871826, 7.757689309073612e-05, 0.056118544191122055, 9.1260919570922852, -13.9807815551757812, 407.440673828125, 0, 1.289351224899292, + as.Date("2012-12-28"), 2012.989, 0.6134037971496582, 2.269216537475586, 1.283769965171814, 5423109.5, 1.2837698459625244, 7.205554084066534e-06, 2.305348971276544e-05, 1.9332976080477237701e-05, 4.747126513393596e-05, 0.0019857806619256735, 0.942355751991272, 0.683927059173584, 7.784494664520025e-05, 0.05766257271170616, 9.226489067077637, -13.461852073669434, 407.4510803222656, 0, 1.2941974401474, + as.Date("2012-12-29"), 2012.992, 0.6415917873382568, 1.417091965675354, 1.1577081680297852, 5336432, 1.1577080488204956, 5.452103778225137e-06, 1.8695485778152943e-05, 1.9115219402010553e-05, 4.709944550995715e-05, 0.002005993854254484, 0.9439074993133544922, 0.6865151524543762, 7.720752182649449e-05, 0.04408273845911026, 9.247989654541016, -16.529571533203125, 408.12200927734375, 0, 1.228645920753479, + as.Date("2012-12-30"), 2012.995, 0.641065239906311, 2.0485310554504395, 1.2120853662490845, 5403400, 1.2120851278305054, 6.013677648297744e-06, 2.01145103346789256e-05, 1.90743758139433339e-05, 4.701365469372831e-05, 0.0020022522658109665, 0.9440022706985474, 0.6860196590423584, 7.732956146355718e-05, 0.04918896034359932, 9.3143243789672852, -15.021018981933594, 408.1629943847656, 0, 1.2530971765518188, + as.Date("2012-12-31"), 2012.997, 0.6406325697898865, 2.7882373332977295, 1.1754714250564575, 5397448, 1.175471305847168, 5.5688242355245166e-06, 1.9047494788537733e-05, 1.92692441487452e-05, 4.75718843517825e-05, 0.0020012541208416224, 0.9441280961036682, 0.6856787204742432, 7.741354056634009e-05, 0.044943343847990036011, 9.352434158325195, -0x1.f8fd7p+3, 408.2173767089844, 0, 1.229854702949524, ) # p-model run check Vcmax25 # `mod_pmodel_vcmax_bysite`: tibble::tribble( - ~date, ~year_dec, ~fapar, ~gpp, ~aet, ~le, ~pet, ~vcmax, ~jmax, ~vcmax25, ~jmax25, ~gs_accl, ~wscal, ~chi, ~iwue, ~rd, ~tsoil, ~netrad, ~wcont, ~snow, ~cond, - as.Date("2001-01-01"), 2001, 1, 0, 0.6863545179367065, 5127286.5, 0.6863547563552856, 0, 0, 0, 0, 0, 0.15577517449855804, 0, 0, 0, -6.900965213775635, 1.099241852760315, 26.494863510131836, 118.05158233642578, 0.532012403011322, - as.Date("2001-01-02"), 2001.003, 1, 0, 0.6910796761512756, 5144462, 0.6910797357559204, 0, 0, 0, 0, 0, 0.1548345535993576, 0, 0, 0, -7.0208563804626465, 1.4972829818725586, 26.3348808288574219, 118.69711303710938, 0.5310977101325989, - as.Date("2001-01-03"), 2001.005, 1, 0, 0.7603365182876587, 5203777.5, 0.7603366374969482, 0, 0, 0, 0, 0, 0.1537633091211319, 0, 0, 0, -7.085480213165283, 2.9861719608306885, 26.152679443359375, 120.51143646240234, 0.5657439827919006, - as.Date("2001-01-04"), 2001.008, 1, 0, 0.7591916918754578, 5223986, 0.759191632270813, 0, 0, 0, 0, 0, 0.15316899120807648, 0, 0, 0, -7.1312432289123535, 3.29844331741333, 26.0515937805175781, 122.96617126464844, 0.5611166954040527, - as.Date("2001-01-05"), 2001.011, 1, 0, 0.7191073298454285, 5224449, 0.7191073894500732, 0, 0, 0, 0, 0, 0.15285874903202057, 0, 0, 0, -7.198423862457275, 2.979424238204956, 25.99882698059082, 126.42135620117188, 0.5352878570556641, - as.Date("2001-01-06"), 2001.014, 1, 0, 0.7418014407157898, 5265682.5, 0.7418014407157898, 0, 0, 0, 0, 0, 0.15235847234725952, 0, 0, 0, -7.2667059898376465, 3.70935177803039551, 25.9137382507324219, 127.49625396728516, 0.5435826182365417, - as.Date("2001-01-07"), 2001.016, 1, 0, 0.7721566557884216, 5314563, 0.7721567749977112, 0, 0, 0, 0, 0, 0.1510847508907318, 0, 0, 0, -7.324454307556152, 4.5652546882629395, 25.697097778320312, 127.975334167480469, 0.5555146932601929, - as.Date("2001-01-08"), 2001.019, 1, 0, 0.8151577115058899, 5373760.5, 0.8151577711105347, 0, 0, 0, 0, 0, 0.1496628075838089, 0, 0, 0, -7.337973117828369, 5.618926525115967, 25.45524787902832, 128.33847045898438, 0.5733078122138977, - as.Date("2001-01-09"), 2001.022, 1, 0, 0.8290091753005981, 5418683.5, 0.8291410207748413, 0, 0, 0, 0, 0, 0.14817439019680023, 0, 0, 0, -7.342429161071777, 6.21811056137085, 25.20209312438965, 129.26576232910156, 0.5758548974990845, - as.Date("2001-01-10"), 2001.025, 1, 0, 0.8130813241004944, 5451778.5, 0.8130813241004944, 0, 0, 0, 0, 0, 0.14701175689697266, 0, 0, 0, -7.36895227432251, 6.362873077392578, 25.004348754882812, 130.4665985107422, 0.563312292098999, - as.Date("2001-01-11"), 2001.027, 1, 0, 0.8033304214477539, 5491087, 0.8033301830291748, 0, 0, 0, 0, 0, 0.145862847566604614, 0, 0, 0, -7.393121719360352, 6.618900299072266, 24.80893707275390625, 131.58265686035156, 0.5539002418518066, - as.Date("2001-01-12"), 2001.03, 1, 0, 0.7932364344596863, 5533734, 0.7932363748550415, 0, 0, 0, 0, 0, 0.14446957409381866, 0, 0, 0, -7.450934410095215, 6.883434772491455, 24.571962356567383, 132.93527221679688, 0.54430091381073, - as.Date("2001-01-13"), 2001.033, 1, 0, 0.7608373165130615, 5567162, 0.7608373165130615, 0, 0, 0, 0, 0, 0.1433829367160797, 0, 0, 0, -7.550407409667969, 6.8151445388793945, 24.387142181396484, 134.5872344970703, 0.5233668088912964, - as.Date("2001-01-14"), 2001.036, 1, 0, 0.7865148186683655, 5637379, 0.786514937877655, 0, 0, 0, 0, 0, 0.1418856531381607, 0, 0, 0, -7.601615905761719, 7.66263866424560547, 24.1324787139892578, 135.17251586914062, 0.5318501591682434, - as.Date("2001-01-15"), 2001.038, 1, 0, 0.790159285068512, 5698585, 0.790159285068512, 0, 0, 0, 0, 0, 0.14035078883171082, 0, 0, 0, -7.625809192657471, 8.180815696716309, 23.871423721313477, 135.60723876953125, 0.5291033387184143, - as.Date("2001-01-16"), 2001.041, 1, 0, 0.8067767024040222, 5749860, 0.8099530339241028, 0, 0, 0, 0, 0, 0.1387484222650528, 0, 0, 0, -7.661136627197266, 8.956686973571777, 23.598886489868164, 136.4365997314453, 0.5342380404472351, - as.Date("2001-01-17"), 2001.044, 1, 0, 0.7927132248878479, 5819874, 0.7941045165061951, 0, 0, 0, 0, 0, 0.1378270536661148, 0, 0, 0, -7.7196149826049805, 9.208984375, 23.442176818847656, 136.8290252685547, 0.5218669772148132, - as.Date("2001-01-18"), 2001.047, 1, 0, 0.8201894760131836, 5830786.5, 0.8330157995223999, 0, 0, 0, 0, 0, 0.1362592726945877, 0, 0, 0, -7.788326263427734, 10.29473686218261719, 23.175521850585938, 137.06529235839844, 0.5360066890716553, - as.Date("2001-01-19"), 2001.049, 1, 0, 0.8499708771705627, 5755406, 0.890085756778717, 0, 0, 0, 0, 0, 0.13458992540836334, 0, 0, 0, -7.840151309967041, 11.64186954498291, 22.89159393310547, 138.17837524414062, 0.557870090007782, - as.Date("2001-01-20"), 2001.052, 1, 0, 0.8515756130218506, 5774576.5, 0.9011492133140564, 0, 0, 0, 0, 0, 0.13286425173282623, 0, 0, 0, -7.870478630065918, 12.332412719726562, 22.59808349609375, 139.30746459960938, 0.5580657124519348, - as.Date("2001-01-21"), 2001.055, 1, 0, 0.8440801501274109, 5841751.5, 0.8942052125930786, 0, 0, 0, 0, 0, 0.1311357319355011, 0, 0, 0, -7.894640922546387, 12.784348487854004, 22.30409049987793, 139.87013244628906, 0.5500866770744324, - as.Date("2001-01-22"), 2001.058, 1, 0, 0.8571810126304626, 5777216.5, 0.9340704083442688, 0, 0, 0, 0, 0, 0.12950031459331512, 0, 0, 0, -7.888361930847168, 13.909854888916016, 22.02593231201172, 140.8984832763672, 0.5630097985267639, - as.Date("2001-01-23"), 2001.06, 1, 0, 0.8483258485794067, 5860592, 0x1.d8ca5ep-1, 0, 0, 0, 0, 0, 0.12801072001457214, 0, 0, 0, -7.875563621520996, 14.347326278686523, 21.77257537841797, 141.36363220214844, 0.5534377098083496, - as.Date("2001-01-24"), 2001.063, 1, 0, 0.8597157001495361, 5794797.5, 0.9634467959403992, 0, 0, 0, 0, 0, 0.1266113966703415, 0, 0, 0, -7.839242935180664, 15.49990177154541, 21.53457260131836, 141.69862365722656, 0.5659580230712891, - as.Date("2001-01-25"), 2001.066, 1, 0, 0.8741552829742432, 5681165, 1.018639326095581, 0, 0, 0, 0, 0, 0.1251884251832962, 0, 0, 0, -7.804049491882324, 16.861499786376953, 21.29254722595215, 142.7994842529297, 0.584282398223877, - as.Date("2001-01-26"), 2001.068, 1, 0, 0.8790796995162964, 5638790, 1.050478458404541, 0, 0, 0, 0, 0, 0x1.fa85p-4, 0, 0, 0, -7.753846645355225, 17.91969108581543, 21.03292655944824219, 143.53343200683594, 0.5923412442207336, - as.Date("2001-01-27"), 2001.071, 1, 0, 0.876562774181366, 5662179.5, 1.06033194065094, 0, 0, 0, 0, 0, 0.12251335382461548, 0, 0, 0, -7.695955753326416, 18.70700454711914, 20.837560653686523, 145.28616333007812, 0.5913159251213074, - as.Date("2001-01-28"), 2001.074, 1, 0, 0.8678221106529236, 5791525, 1.0414165258407593, 0, 0, 0, 0, 0, 0.121049702167510986, 0, 0, 0, -7.668400287628174, 19.143226623535156, 20.5886173248291, 147.49485778808594, 0.5786837935447693, - as.Date("2001-01-29"), 2001.077, 1, 0, 0.8555442094802856, 5939188, 1.015807867050171, 0, 0, 0, 0, 0, 0.119491204619407654, 0, 0, 0, -7.652742385864258, 19.516273498535156, 20.32354164123535, 149.59690856933594, 0.5632975697517395, - as.Date("2001-01-30"), 2001.079, 1, 0, 0.8565182685852051, 5922832, 1.0386865139007568, 0, 0, 0, 0, 0, 0.1188756600022316, 0, 0, 0, -7.638304233551025, 20.5429630279541, 20.218847274780273, 152.50624084472656, 0.5676791667938232, - as.Date("2001-12-02"), 2001.918, 1, 2.3761579990386963, 0.8421381711959839, 5318220.5, 0.8421379923820496, 9.238155143975746e-06, 3.4765569580486044e-05, 0.000102435034932568669, 0.00025469387765042484, 0.002106043742969632, 0.17321084439754486, 0.5129956603050232, 0.00011750154226319864, 0.08195680379867554, -2.3879079818725586, 7.960274696350098, 29.460391998291016, 61.60345458984375, 0.5594557523727417, - as.Date("2001-12-03"), 2001.921, 1, 2.1134016513824463, 0.8328382968902588, 5306056.5, 0.832838237285614, 9.13223539100727e-06, 3.440919317654334e-05, 0.0001021048374241218, 0.00025506230304017663, 0.002106983447447419, 0.17237941920757294, 0.5121756196022034, 0.00011769939737860113382, 0.07984130829572678, -2.567384719848633, 7.231736183166504, 29.318981170654297, 63.71833038330078, 0.5629106760025024, - as.Date("2001-12-04"), 2001.923, 1, 2.1044881343841553, 0.811103880405426, 5286398, 0.811103880405426, 8.92318621481536e-06, 3.3483018341939896e-05, 0.00010183893755311146, 0.00025567025295458734, 0.0021074775140732527, 0.17174746096134186, 0.5112086534500122, 0.00011793270823545754, 0.07510477304458618, -2.7490904331207275, 6.333159923553467, 29.21149444580078, 66.17680358886719, 0.5597774386405945, - as.Date("2001-12-05"), 2001.926, 1, 2.2088072299957275, 0.7677724361419678, 5253766.5, 0.7677724361419678, 8.572139449825045e-06, 3.169446426909417e-05, 0.00010184269194724038, 0.0002571508812252432, 0.0021065694745630026, 0.17071141302585602, 0.5098239779472351, 0.000118266791105270386, 0.06642334908246994, -2.9544434547424316, 5.109783172607422, 29.035280227661133, 67.62126159667969, 0.5448256731033325, - as.Date("2001-12-06"), 2001.929, 1, 2.069648027420044, 0.7606203556060791, 5241368.5, 0.7606202363967896, 8.513841748936102e-06, 3.156462844344787e-05, 0.000101694953627884388, 0.0002582583692856133, 0.0021057503763586283, 0.16986967623233795, 0.5084670186042786, 0.00011859418009407818, 0.0651845932006836, -3.14532470703125, 4.472254276275635, 28.892114639282227, 69.32316589355469, 0.5475925803184509, - as.Date("2001-12-07"), 2001.932, 1, 2.010303258895874, 0.7765268087387085, 5242302.5, 0.7765268087387085, 8.625824193586595e-06, 3.243888932047412e-05, 0.0001013940927805379, 0.0002588940551504493, 0.002107520354911685, 0.16927623748779297, 0.5077347755432129, 0.00011877084762090817094, 0.06840202957391739, -3.340066432952881, 4.233431816101074, 28.7911796569824219, 72.0921401977539, 0.5621109008789062, - as.Date("2001-12-08"), 2001.934, 1, 2.04943323135375977, 0.7802998423576355, 5236231.5, 0.7802999019622803, 8.643572982691694e-06, 3.276014467701316e-05, 0.000101110803370829671621, 0.00025952933356165886, 0.0021103271283209324, 0.16869015991687775, 0.5072590112686157, 0.000118885654956102371, 0.06924737989902496, -3.5420477390289307, 3.8303935527801514, 28.69149589538574219, 75.68986511230469, 0.5699682831764221, - as.Date("2001-12-09"), 2001.937, 1, 2.1963582038879395, 0.7383967041969299, 5203231, 0.7383967041969299, 8.329047886945773e-06, 3.108903911197558e-05, 0.0001011491913232021, 0.00026115955552086234, 0.0021103823091834784, 0.16786274313926697, 0.5060895085334778, 0.0001191678165923804, 0.06136154383420944, -3.7663464546203613281, 2.705937385559082, 28.55076789855957, 77.42729187011719, 0.5528512597084045, - as.Date("2001-12-10"), 2001.94, 1, 2.2196555137634277, 0.7348957657814026, 5193030.5, 0.7348958849906921, 8.317583706229925e-06, 3.118735912721604e-05, 0x1.a88396p-14, 0.0002628353249747306, 0.002110253321006894, 0.1671770215034485, 0.5049146413803101, 0.00011945128062507138, 0.060981836169958115, -3.984025716781616, 2.2391810417175293, 28.43413543701172, 78.49776458740234, 0.5558723211288452, - as.Date("2001-12-11"), 2001.942, 1, 2.1254067420959473, 0.7622200846672058, 5201634.5, 0.7622199654579163, 8.522854841430672e-06, 3.2611766073387116e-05, 0.00010104354441864416, 0.00026372604770585895, 0.00211175624281168, 0.16654786467552185, 0.5042364001274109, 0.00011961492418777198, 0.06634895503520966, -4.161430835723877, 2.3216724395751953, 28.32712745666504, 80.89241790771484, 0.575542688369751, - as.Date("2001-12-12"), 2001.945, 1, 2.067744255065918, 0.7533095479011536, 5188863.5, 0.7533094882965088, 8.44314035930438e-06, 3.2346102670999244e-05, 0.00010081945947604254, 0.00026452302699908614, 0.0021143846679478884, 0.16557452082633972, 0.5038109421730042, 0.00011971756612183526, 0.06468909233808517, -4.312930107116699, 1.8305381536483765, 28.161577224731445, 82.07788848876953, 0.5749035477638245, - as.Date("2001-12-13"), 2001.948, 1, 2.1112818717956543, 0.7999453544616699, 5209769, 0.7999452948570251, 8.811106454231776e-06, 3.469984221737832e-05, 0.0001004933074000291526318, 0.00026470652665011585, 0.0021177856251597404, 0.16455473005771637, 0.5037769675254822, 0.00011972577340202406, 0.0742545798420906, -4.427644729614258, 2.3034605979919434, 0x1.bfcf5ep+4, 83.10405731201172, 0.604318380355835, - as.Date("2001-12-14"), 2001.951, 1, 1.966104507446289, 0.822148859500885, 5216465, 0.822148859500885, 8.971223905973602e-06, 3.582108183763921e-05, 9.991958359023556e-05, 0.00026408201665617526, 0.002122877398505807, 0.16489651799201965, 0.5041717886924744, 0.000119630516564939171, 0.07897106558084488, -4.546931266784668, 2.400254726409912, 28.0462589263916, 86.2448959350586, 0.6198142766952515, - as.Date("2001-12-15"), 2001.953, 1, 1.8881080150604248, 0.762490451335907, 5174808, 0.7624903321266174, 8.42462668515509e-06, 3.287045183242299e-05, 9.944679914042354e-05, 0.00026404016534797847, 0.00212581525556743145, 0.16423310339450836, 0.5038852095603943, 0.00011969965999014676, 0.06620708853006363, -4.679988861083984, 1.1606857776641846, 27.93342399597168, 89.11851501464844, 0.5903746485710144, - as.Date("2001-12-16"), 2001.956, 1, 2.048431396484375, 0.7103734612464905, 5137298, 0.7103735208511353, 8.034267921175342e-06, 3.065661439904943e-05, 9.9353041150607169e-05, 0.00026528106536716223, 0.002126257633790374, 0.1633676439523697, 0.5029467940330505, 0.00011992607323918492, 0.05658705532550812, -4.833094596862793, 0.051695600152015686, 27.78622245788574219, 89.5700912475586, 0.5631709098815918, - as.Date("2001-12-17"), 2001.959, 1, 2.03548264503479, 0.7334035038948059, 5146650, 0.7334036231040955, 8.189585969375912e-06, 3.182801810908131e-05, 9.91566848824732e-05, 0.0002660775207914412, 0.002128171268850565, 0.1625654101371765, 0.5024563670158386, 0.00012004440213786438, 0.060767628252506256, -4.982266902923584, 0.27981770038604736, 27.6497745513916, 91.464469909667969, 0.5786212086677551, - as.Date("2001-12-18"), 2001.962, 1, 2.0534143447875977, 0.7398825287818909, 5146382, 0.7398824691772461, 8.226677891798317e-06, 3.224816100555472e-05, 9.89596956060268e-05, 0.0002668017987161875, 0.0021306280978024006, 0.1616491973400116, 0.5021564960479736, 0.00012011675426037982, 0.061981361359357834, -5.13588285446167, 0.2541811466217041, 27.493942260742188, 0x1.70825p+6, 0.5840510725975037, - as.Date("2001-12-19"), 2001.964, 1, 1.9297959804534912, 0.7872318625450134, 5171678, 0.7872318029403687, 8.567712029616814e-06, 3.453145473031327e-05, 9.845767635852098e-05, 0.0002663651539478451, 0.002134864218533039, 0.16133853793144226, 0.5024557113647461, 0.000120044562208931893, 0.07115571945905685, -5.27288293838501, 0.965925931930542, 27.441102981567383, 93.32218170166016, 0.6120834946632385, - as.Date("2001-12-20"), 2001.967, 1, 1.8476736545562744, 0.7982625365257263, 5175441, 0.7982624769210815, 8.611417797510512e-06, 3.5003078664885834e-05, 9.782520646695048e-05, 0.00026547169545665383, 0.0021396931260824203, 0.16186846792697906, 0.5029148459434509, 0.00011993377847829834, 0.07312244921922684, -5.410983085632324, 1.0871556997299194, 27.53123664855957, 0x1.859ea2p+6, 0.619053840637207, - as.Date("2001-12-21"), 2001.97, 1, 1.7662659883499146, 0.7661707997322083, 5153790, 0.7661707401275635, 8.292422535305377e-06, 3.331829429953359e-05, 9.719292575027794e-05, 0.00026473592151887715, 0.0021431546192616224, 0.16178789734840393, 0.5029454231262207, 0.00011992640065727755, 0.06616327911615372, -5.545641899108887, 0.5080526471138, 27.517532348632812, 99.6747817993164, 0.6015464663505554, - as.Date("2001-12-22"), 2001.973, 1, 1.9852652549743652, 0.7396084070205688, 5135990, 0.7396083474159241, 8.067576345638372e-06, 3.211259900126606e-05, 9.6926589321810752153e-05, 0.00026516232173889875, 0.0021469888743013144, 0.16161756217479706, 0.5029696226119995, 0.0001199205726152286, 0.06095569580793381, -5.682883262634277, 0.05253761634230614, 27.488561630249023, 103.02400970458984, 0.5863370895385742, - as.Date("2001-12-23"), 2001.975, 1, 1.9923697710037231, 0.717324435710907, 5121375, 0.717324435710907, 7.892091161920689e-06, 3.1179686629911885e-05, 9.673689783085138e-05, 0.0002659055753611028, 0.002149547915905714, 0.16112226247787476, 0.5026935338973999, 0.000119987176731228828, 0.05683897063136101, -5.8183441162109375, -0.2975839078426361, 27.40431785583496, 105.20638275146484, 0.5729063749313354, - as.Date("2001-12-24"), 2001.978, 1, 0, 0.6868863701820374, 5102179.5, 0.6868864297866821, 0, 0, 0, 0, 0, 0.1604132056236267, 0, 0, 0, -5.961957931518555, -0.7614265084266663, 27.283720016479492, 106.3023452758789, 0.5540046691894531, - as.Date("2001-12-25"), 2001.981, 1, 0, 0.6715438365936279, 5093070.5, 0.6715440154075623, 0, 0, 0, 0, 0, 0.159831538796424866, 0, 0, 0, -6.100887775421143, -0.9236978888511658, 27.18478775024414, 108.16641998291016, 0.5434944033622742, - as.Date("2001-12-26"), 2001.984, 1, 0, 0.7116617560386658, 5119647, 0.711661696434021, 0, 0, 0, 0, 0, 0.15908542275428772, 0, 0, 0, -6.21033239364624, -0.06064525619149208, 27.057884216308594, 109.73582458496094, 0.5655392408370972, - as.Date("2001-12-27"), 2001.986, 1, 0, 0.703535795211792, 5116523.5, 0.703535795211792, 0, 0, 0, 0, 0, 0.1583794355392456, 0, 0, 0, -6.317815780639648, -0.01974247768521309, 26.937807083129883, 111.1014404296875, 0.5585963129997253, - as.Date("2001-12-28"), 2001.989, 1, 0, 0.6820993423461914, 5105687.5, 0.6820994019508362, 0, 0, 0, 0, 0, 0.15775533020496368, 0, 0, 0, -6.44408655166626, -0.17851273715496063, 26.83165740966797, 112.1114501953125, 0.5434092879295349, - as.Date("2001-12-29"), 2001.992, 1, 0, 0.7055718302726746, 5123509, 0.7055718898773193, 0, 0, 0, 0, 0, 0.15765365958213806, 0, 0, 0, -6.553651809692383, 0.4891956150531769, 26.81436538696289, 114.75765991210938, 0.5541570782661438, - as.Date("2001-12-30"), 2001.995, 1, 0, 0.6925515532493591, 5119132.5, 0.6925514340400696, 0, 0, 0, 0, 0, 0.15746720135211945, 0, 0, 0, -6.66290283203125, 0.5510300993919373, 26.782651901245117, 116.11558532714844, 0.5432031154632568, - as.Date("2001-12-31"), 2001.997, 1, 0, 0.6972773671150208, 5126259.5, 0.697277307510376, 0, 0, 0, 0, 0, 0.15664146840572357, 0, 0, 0, -6.773774147033691, 0x1.e9df02p-1, 26.64220809936523438, 117.10972595214844, 0.5421504378318787, + ~date, ~year_dec, ~fapar, ~gpp, ~aet, ~le, ~pet, ~vcmax, ~jmax, ~vcmax25, ~jmax25, ~gs_accl, ~wscal, ~chi, ~iwue, ~rd, ~tsoil, ~netrad, ~wcont, ~snow, ~cond, + as.Date("2001-01-01"), 2001, 1, 0, 0.6863545179367065, 5127286.5, 0.6863547563552856, 0, 0, 0, 0, 0, 0.15577517449855804, 0, 0, 0, -6.900965213775635, 1.099241852760315, 26.494863510131836, 118.05158233642578, 0.532012403011322, + as.Date("2001-01-02"), 2001.003, 1, 0, 0.6910796761512756, 5144462, 0.6910797357559204, 0, 0, 0, 0, 0, 0.1548345535993576, 0, 0, 0, -7.0208563804626465, 1.4972829818725586, 26.3348808288574219, 118.69711303710938, 0.5310977101325989, + as.Date("2001-01-03"), 2001.005, 1, 0, 0.7603365182876587, 5203777.5, 0.7603366374969482, 0, 0, 0, 0, 0, 0.1537633091211319, 0, 0, 0, -7.085480213165283, 2.9861719608306885, 26.152679443359375, 120.51143646240234, 0.5657439827919006, + as.Date("2001-01-04"), 2001.008, 1, 0, 0.7591916918754578, 5223986, 0.759191632270813, 0, 0, 0, 0, 0, 0.15316899120807648, 0, 0, 0, -7.1312432289123535, 3.29844331741333, 26.0515937805175781, 122.96617126464844, 0.5611166954040527, + as.Date("2001-01-05"), 2001.011, 1, 0, 0.7191073298454285, 5224449, 0.7191073894500732, 0, 0, 0, 0, 0, 0.15285874903202057, 0, 0, 0, -7.198423862457275, 2.979424238204956, 25.99882698059082, 126.42135620117188, 0.5352878570556641, + as.Date("2001-01-06"), 2001.014, 1, 0, 0.7418014407157898, 5265682.5, 0.7418014407157898, 0, 0, 0, 0, 0, 0.15235847234725952, 0, 0, 0, -7.2667059898376465, 3.70935177803039551, 25.9137382507324219, 127.49625396728516, 0.5435826182365417, + as.Date("2001-01-07"), 2001.016, 1, 0, 0.7721566557884216, 5314563, 0.7721567749977112, 0, 0, 0, 0, 0, 0.1510847508907318, 0, 0, 0, -7.324454307556152, 4.5652546882629395, 25.697097778320312, 127.975334167480469, 0.5555146932601929, + as.Date("2001-01-08"), 2001.019, 1, 0, 0.8151577115058899, 5373760.5, 0.8151577711105347, 0, 0, 0, 0, 0, 0.1496628075838089, 0, 0, 0, -7.337973117828369, 5.618926525115967, 25.45524787902832, 128.33847045898438, 0.5733078122138977, + as.Date("2001-01-09"), 2001.022, 1, 0, 0.8290091753005981, 5418683.5, 0.8291410207748413, 0, 0, 0, 0, 0, 0.14817439019680023, 0, 0, 0, -7.342429161071777, 6.21811056137085, 25.20209312438965, 129.26576232910156, 0.5758548974990845, + as.Date("2001-01-10"), 2001.025, 1, 0, 0.8130813241004944, 5451778.5, 0.8130813241004944, 0, 0, 0, 0, 0, 0.14701175689697266, 0, 0, 0, -7.36895227432251, 6.362873077392578, 25.004348754882812, 130.4665985107422, 0.563312292098999, + as.Date("2001-01-11"), 2001.027, 1, 0, 0.8033304214477539, 5491087, 0.8033301830291748, 0, 0, 0, 0, 0, 0.145862847566604614, 0, 0, 0, -7.393121719360352, 6.618900299072266, 24.80893707275390625, 131.58265686035156, 0.5539002418518066, + as.Date("2001-01-12"), 2001.03, 1, 0, 0.7932364344596863, 5533734, 0.7932363748550415, 0, 0, 0, 0, 0, 0.14446957409381866, 0, 0, 0, -7.450934410095215, 6.883434772491455, 24.571962356567383, 132.93527221679688, 0.54430091381073, + as.Date("2001-01-13"), 2001.033, 1, 0, 0.7608373165130615, 5567162, 0.7608373165130615, 0, 0, 0, 0, 0, 0.1433829367160797, 0, 0, 0, -7.550407409667969, 6.8151445388793945, 24.387142181396484, 134.5872344970703, 0.5233668088912964, + as.Date("2001-01-14"), 2001.036, 1, 0, 0.7865148186683655, 5637379, 0.786514937877655, 0, 0, 0, 0, 0, 0.1418856531381607, 0, 0, 0, -7.601615905761719, 7.66263866424560547, 24.1324787139892578, 135.17251586914062, 0.5318501591682434, + as.Date("2001-01-15"), 2001.038, 1, 0, 0.790159285068512, 5698585, 0.790159285068512, 0, 0, 0, 0, 0, 0.14035078883171082, 0, 0, 0, -7.625809192657471, 8.180815696716309, 23.871423721313477, 135.60723876953125, 0.5291033387184143, + as.Date("2001-01-16"), 2001.041, 1, 0, 0.8067767024040222, 5749860, 0.8099530339241028, 0, 0, 0, 0, 0, 0.1387484222650528, 0, 0, 0, -7.661136627197266, 8.956686973571777, 23.598886489868164, 136.4365997314453, 0.5342380404472351, + as.Date("2001-01-17"), 2001.044, 1, 0, 0.7927132248878479, 5819874, 0.7941045165061951, 0, 0, 0, 0, 0, 0.1378270536661148, 0, 0, 0, -7.7196149826049805, 9.208984375, 23.442176818847656, 136.8290252685547, 0.5218669772148132, + as.Date("2001-01-18"), 2001.047, 1, 0, 0.8201894760131836, 5830786.5, 0.8330157995223999, 0, 0, 0, 0, 0, 0.1362592726945877, 0, 0, 0, -7.788326263427734, 10.29473686218261719, 23.175521850585938, 137.06529235839844, 0.5360066890716553, + as.Date("2001-01-19"), 2001.049, 1, 0, 0.8499708771705627, 5755406, 0.890085756778717, 0, 0, 0, 0, 0, 0.13458992540836334, 0, 0, 0, -7.840151309967041, 11.64186954498291, 22.89159393310547, 138.17837524414062, 0.557870090007782, + as.Date("2001-01-20"), 2001.052, 1, 0, 0.8515756130218506, 5774576.5, 0.9011492133140564, 0, 0, 0, 0, 0, 0.13286425173282623, 0, 0, 0, -7.870478630065918, 12.332412719726562, 22.59808349609375, 139.30746459960938, 0.5580657124519348, + as.Date("2001-01-21"), 2001.055, 1, 0, 0.8440801501274109, 5841751.5, 0.8942052125930786, 0, 0, 0, 0, 0, 0.1311357319355011, 0, 0, 0, -7.894640922546387, 12.784348487854004, 22.30409049987793, 139.87013244628906, 0.5500866770744324, + as.Date("2001-01-22"), 2001.058, 1, 0, 0.8571810126304626, 5777216.5, 0.9340704083442688, 0, 0, 0, 0, 0, 0.12950031459331512, 0, 0, 0, -7.888361930847168, 13.909854888916016, 22.02593231201172, 140.8984832763672, 0.5630097985267639, + as.Date("2001-01-23"), 2001.06, 1, 0, 0.8483258485794067, 5860592, 0x1.d8ca5ep-1, 0, 0, 0, 0, 0, 0.12801072001457214, 0, 0, 0, -7.875563621520996, 14.347326278686523, 21.77257537841797, 141.36363220214844, 0.5534377098083496, + as.Date("2001-01-24"), 2001.063, 1, 0, 0.8597157001495361, 5794797.5, 0.9634467959403992, 0, 0, 0, 0, 0, 0.1266113966703415, 0, 0, 0, -7.839242935180664, 15.49990177154541, 21.53457260131836, 141.69862365722656, 0.5659580230712891, + as.Date("2001-01-25"), 2001.066, 1, 0, 0.8741552829742432, 5681165, 1.018639326095581, 0, 0, 0, 0, 0, 0.1251884251832962, 0, 0, 0, -7.804049491882324, 16.861499786376953, 21.29254722595215, 142.7994842529297, 0.584282398223877, + as.Date("2001-01-26"), 2001.068, 1, 0, 0.8790796995162964, 5638790, 1.050478458404541, 0, 0, 0, 0, 0, 0x1.fa85p-4, 0, 0, 0, -7.753846645355225, 17.91969108581543, 21.03292655944824219, 143.53343200683594, 0.5923412442207336, + as.Date("2001-01-27"), 2001.071, 1, 0, 0.876562774181366, 5662179.5, 1.06033194065094, 0, 0, 0, 0, 0, 0.12251335382461548, 0, 0, 0, -7.695955753326416, 18.70700454711914, 20.837560653686523, 145.28616333007812, 0.5913159251213074, + as.Date("2001-01-28"), 2001.074, 1, 0, 0.8678221106529236, 5791525, 1.0414165258407593, 0, 0, 0, 0, 0, 0.121049702167510986, 0, 0, 0, -7.668400287628174, 19.143226623535156, 20.5886173248291, 147.49485778808594, 0.5786837935447693, + as.Date("2001-01-29"), 2001.077, 1, 0, 0.8555442094802856, 5939188, 1.015807867050171, 0, 0, 0, 0, 0, 0.119491204619407654, 0, 0, 0, -7.652742385864258, 19.516273498535156, 20.32354164123535, 149.59690856933594, 0.5632975697517395, + as.Date("2001-01-30"), 2001.079, 1, 0, 0.8565182685852051, 5922832, 1.0386865139007568, 0, 0, 0, 0, 0, 0.1188756600022316, 0, 0, 0, -7.638304233551025, 20.5429630279541, 20.218847274780273, 152.50624084472656, 0.5676791667938232, + as.Date("2001-12-02"), 2001.918, 1, 2.3761579990386963, 0.8421381711959839, 5318220.5, 0.8421379923820496, 8.304754373966716e-06, 3.3110074582509696e-05, 5.603405588772148e-05, 0.00020027346909046173, 0.002106043742969632, 0.17321084439754486, 0.5129956603050232, 0.00011750154226319864, 0.04483204334974289, -2.3879079818725586, 7.960274696350098, 29.460391998291016, 61.60345458984375, 0.5594557523727417, + as.Date("2001-12-03"), 2001.921, 1, 2.1134016513824463, 0.8328382968902588, 5306056.5, 0.832838237285614, 8.187701496353839e-06, 3.2710111554479226e-05, 5.549960405915044e-05, 0.0002004769630730152, 0.002106983447447419, 0.17237941920757294, 0.5121756196022034, 0.00011769939737860113382, 0.04339815676212311, -2.567384719848633, 7.231736183166504, 29.318981170654297, 63.71833038330078, 0.5629106760025024, + as.Date("2001-12-04"), 2001.923, 1, 2.1044881343841553, 0.811103880405426, 5286398, 0.811103880405426, 7.89937621448189e-06, 3.162146458635107e-05, 5.498072277987376e-05, 0.00020086886070203036, 0.0021074775140732527, 0.17174746096134186, 0.5112086534500122, 0.00011793270823545754, 0.040547508746385574, -2.7490904331207275, 6.333159923553467, 29.21149444580078, 66.17680358886719, 0.5597774386405945, + as.Date("2001-12-05"), 2001.926, 1, 2.2088072299957275, 0.7677724361419678, 5253766.5, 0.7677724361419678, 7.3455198617011774e-06, 2.9448874556692317e-05, 5.4549927881453186e-05, 0.0002019399544224143, 0.0021065694745630026, 0.17071141302585602, 0.5098239779472351, 0.000118266791105270386, 0.03557829186320305, -2.9544434547424316, 5.109783172607422, 29.035280227661133, 67.62126159667969, 0.5448256731033325, + as.Date("2001-12-06"), 2001.929, 1, 2.069648027420044, 0.7606203556060791, 5241368.5, 0.7606202363967896, 7.294549504877068e-06, 2.92933273158269e-05, 5.404596959124319e-05, 0.00020272660185582936, 0.0021057503763586283, 0.16986967623233795, 0.5084670186042786, 0.00011859418009407818, 0.034642476588487625, -3.14532470703125, 4.472254276275635, 28.892114639282227, 69.32316589355469, 0.5475925803184509, + as.Date("2001-12-07"), 2001.932, 1, 2.010303258895874, 0.7765268087387085, 5242302.5, 0.7765268087387085, 7.545770586148137e-06, 3.0380420867004432e-05, 5.350930587155744433e-05, 0.00020315905567258596, 0.002107520354911685, 0.16927623748779297, 0.5077347755432129, 0.00011877084762090817094, 0.036098212003707886, -3.340066432952881, 4.233431816101074, 28.7911796569824219, 72.0921401977539, 0.5621109008789062, + as.Date("2001-12-08"), 2001.934, 1, 2.04943323135375977, 0.7802998423576355, 5236231.5, 0.7802999019622803, 7.629351784999017e-06, 3.079083762713708e-05, 5.3007530368631706e-05, 0.000203600968234241, 0.0021103271283209324, 0.16869015991687775, 0.5072590112686157, 0.000118885654956102371, 0.036303069442510605, -3.5420477390289307, 3.8303935527801514, 28.69149589538574219, 75.68986511230469, 0.5699682831764221, + as.Date("2001-12-09"), 2001.937, 1, 2.1963582038879395, 0.7383967041969299, 5203231, 0.7383967041969299, 7.118350367818493e-06, 2.8726792152156122029e-05, 5.261979822535068e-05, 0.00020482206309679896, 0.0021103823091834784, 0.16786274313926697, 0.5060895085334778, 0.0001191678165923804, 0.03192147985100746, -3.7663464546203613281, 2.705937385559082, 28.55076789855957, 77.42729187011719, 0.5528512597084045, + as.Date("2001-12-10"), 2001.94, 1, 2.2196555137634277, 0.7348957657814026, 5193030.5, 0.7348958849906921, 7.131833626772277e-06, 2.8833628675783984e-05, 5.225670611253008e-05, 0.00020608842896763235, 0.002110253321006894, 0.1671770215034485, 0.5049146413803101, 0.00011945128062507138, 0.031485483050346375, -3.984025716781616, 2.2391810417175293, 28.43413543701172, 78.49776458740234, 0.5558723211288452, + as.Date("2001-12-11"), 2001.942, 1, 2.1254067420959473, 0.7622200846672058, 5201634.5, 0.7622199654579163, 7.538174031651579e-06, 3.06052497762721e-05, 5.1838826038874686e-05, 0x1.b197b6p-13, 0.00211175624281168, 0.16654786467552185, 0.5042364001274109, 0.00011961492418777198, 0.03403930366039276, -4.161430835723877, 2.3216724395751953, 28.32712745666504, 80.89241790771484, 0.575542688369751, + as.Date("2001-12-12"), 2001.945, 1, 2.067744255065918, 0.7533095479011536, 5188863.5, 0.7533094882965088, 7.44919634598773e-06, 3.0294384487206116e-05, 5.13936320203356444836e-05, 0.00020735006546601653, 0.0021143846679478884, 0.16557452082633972, 0.5038109421730042, 0.00011971756612183526, 0.03297584876418114, -4.312930107116699, 1.8305381536483765, 28.161577224731445, 82.07788848876953, 0.5749035477638245, + as.Date("2001-12-13"), 2001.948, 1, 2.1112818717956543, 0.7999453544616699, 5209769, 0.7999452948570251, 8.113247531582601e-06, 3.320854011690244e-05, 5.098940528114326e-05, 0.00020747765665873885, 0.0021177856251597404, 0.16455473005771637, 0.5037769675254822, 0.00011972577340202406, 0.03767610713839531, -4.427644729614258, 2.3034605979919434, 0x1.bfcf5ep+4, 83.10405731201172, 0.604318380355835, + as.Date("2001-12-14"), 2001.951, 1, 1.966104507446289, 0.822148859500885, 5216465, 0.822148859500885, 8.421417078352533e-06, 3.461781670921482e-05, 5.05081370647531e-05, 0.0002069779293378815, 0.002122877398505807, 0.16489651799201965, 0.5041717886924744, 0.000119630516564939171, 0.03991891071200371, -4.546931266784668, 2.400254726409912, 28.0462589263916, 86.2448959350586, 0.6198142766952515, + as.Date("2001-12-15"), 2001.953, 1, 1.8881080150604248, 0.762490451335907, 5174808, 0.7624903321266174, 7.585131697851466e-06, 3.106518488493748e-05, 4.9992384447250515e-05, 0.0002069336624117568, 0.00212581525556743145, 0.16423310339450836, 0.5038852095603943, 0.00011969965999014676, 0.033282626420259476, -4.679988861083984, 1.1606857776641846, 27.93342399597168, 89.11851501464844, 0.5903746485710144, + as.Date("2001-12-16"), 2001.956, 1, 2.048431396484375, 0.7103734612464905, 5137298, 0.7103735208511353, 6.937645139259985e-06, 2.8309788831393234432e-05, 4.959485158906318e-05, 0.000207898701773956418, 0.002126257633790374, 0.1633676439523697, 0.5029467940330505, 0.00011992607323918492, 0.028247013688087463, -4.833094596862793, 0.051695600152015686, 27.78622245788574219, 89.5700912475586, 0.5631709098815918, + as.Date("2001-12-17"), 2001.959, 1, 2.03548264503479, 0.7334035038948059, 5146650, 0.7334036231040955, 7.263844963745214e-06, 2.979765849886462e-05, 4.919994898955338e-05, 0.00020852322631981224, 0.002128171268850565, 0.1625654101371765, 0.5024563670158386, 0.00012004440213786438, 0.03015192039310932, -4.982266902923584, 0.27981770038604736, 27.6497745513916, 91.464469909667969, 0.5786212086677551, + as.Date("2001-12-18"), 2001.962, 1, 2.0534143447875977, 0.7398825287818909, 5146382, 0.7398824691772461, 7.372369964286918e-06, 3.03418164548929781e-05, 4.882866414845921e-05, 0.00020909593149553984, 0.0021306280978024006, 0.1616491973400116, 0.5021564960479736, 0.00012011675426037982, 0.03058282658457756, -5.13588285446167, 0.2541811466217041, 27.493942260742188, 0x1.70825p+6, 0.5840510725975037, + as.Date("2001-12-19"), 2001.964, 1, 1.9297959804534912, 0.7872318625450134, 5171678, 0.7872318029403687, 8.001634341781028e-06, 3.32219096890185e-05, 4.839499160880223e-05, 0.0002087602188112214207649, 0.002134864218533039, 0.16133853793144226, 0.5024557113647461, 0.000120044562208931893, 0.03497523441910744, -5.27288293838501, 0.965925931930542, 27.441102981567383, 93.32218170166016, 0.6120834946632385, + as.Date("2001-12-20"), 2001.967, 1, 1.8476736545562744, 0.7982625365257263, 5175441, 0.7982624769210815, 8.126450666168239e-06, 3.386256139492616e-05, 4.7924058890203014e-05, 0.00020806744578294456, 0.0021396931260824203, 0.16186846792697906, 0.5029148459434509, 0.00011993377847829834, 0.0358223132789135, -5.410983085632324, 1.0871556997299194, 27.53123664855957, 0x1.859ea2p+6, 0.619053840637207, + as.Date("2001-12-21"), 2001.97, 1, 1.7662659883499146, 0.7661707997322083, 5153790, 0.7661707401275635, 7.663312317163218e-06, 3.185087552992627e-05, 4.7411900595761835575e-05, 0.00020750300609506667, 0.0021431546192616224, 0.16178789734840393, 0.5029454231262207, 0.00011992640065727755, 0.0322752520442009, -5.545641899108887, 0.5080526471138, 27.517532348632812, 99.6747817993164, 0.6015464663505554, + as.Date("2001-12-22"), 2001.973, 1, 1.9852652549743652, 0.7396084070205688, 5135990, 0.7396083474159241, 7.3213996074628084898e-06, 3.0375098504009657e-05, 4.7046476538525894e-05, 0.000207855613552965224, 0.0021469888743013144, 0.16161756217479706, 0.5029696226119995, 0.0001199205726152286, 0.029586834833025932, -5.682883262634277, 0.05253761634230614, 27.488561630249023, 103.02400970458984, 0.5863370895385742, + as.Date("2001-12-23"), 2001.975, 1, 1.9923697710037231, 0.717324435710907, 5121375, 0.717324435710907, 7.052143701002933e-06, 2.9218508643680252e-05, 4.66934907308314e-05, 0.0002084634907077998, 0.002149547915905714, 0.16112226247787476, 0.5026935338973999, 0.000119987176731228828, 0.027435339987277985, -5.8183441162109375, -0.2975839078426361, 27.40431785583496, 105.20638275146484, 0.5729063749313354, + as.Date("2001-12-24"), 2001.978, 1, 0, 0.6868863701820374, 5102179.5, 0.6868864297866821, 0, 0, 0, 0, 0, 0.1604132056236267, 0, 0, 0, -5.961957931518555, -0.7614265084266663, 27.283720016479492, 106.3023452758789, 0.5540046691894531, + as.Date("2001-12-25"), 2001.981, 1, 0, 0.6715438365936279, 5093070.5, 0.6715440154075623, 0, 0, 0, 0, 0, 0.159831538796424866, 0, 0, 0, -6.100887775421143, -0.9236978888511658, 27.18478775024414, 108.16641998291016, 0.5434944033622742, + as.Date("2001-12-26"), 2001.984, 1, 0, 0.7116617560386658, 5119647, 0.711661696434021, 0, 0, 0, 0, 0, 0.15908542275428772, 0, 0, 0, -6.21033239364624, -0.06064525619149208, 27.057884216308594, 109.73582458496094, 0.5655392408370972, + as.Date("2001-12-27"), 2001.986, 1, 0, 0.703535795211792, 5116523.5, 0.703535795211792, 0, 0, 0, 0, 0, 0.1583794355392456, 0, 0, 0, -6.317815780639648, -0.01974247768521309, 26.937807083129883, 111.1014404296875, 0.5585963129997253, + as.Date("2001-12-28"), 2001.989, 1, 0, 0.6820993423461914, 5105687.5, 0.6820994019508362, 0, 0, 0, 0, 0, 0.15775533020496368, 0, 0, 0, -6.44408655166626, -0.17851273715496063, 26.83165740966797, 112.1114501953125, 0.5434092879295349, + as.Date("2001-12-29"), 2001.992, 1, 0, 0.7055718302726746, 5123509, 0.7055718898773193, 0, 0, 0, 0, 0, 0.15765365958213806, 0, 0, 0, -6.553651809692383, 0.4891956150531769, 26.81436538696289, 114.75765991210938, 0.5541570782661438, + as.Date("2001-12-30"), 2001.995, 1, 0, 0.6925515532493591, 5119132.5, 0.6925514340400696, 0, 0, 0, 0, 0, 0.15746720135211945, 0, 0, 0, -6.66290283203125, 0.5510300993919373, 26.782651901245117, 116.11558532714844, 0.5432031154632568, + as.Date("2001-12-31"), 2001.997, 1, 0, 0.6972773671150208, 5126259.5, 0.697277307510376, 0, 0, 0, 0, 0, 0.15664146840572357, 0, 0, 0, -6.773774147033691, 0x1.e9df02p-1, 26.64220809936523438, 117.10972595214844, 0.5421504378318787, ) diff --git a/tests/testthat/test-likelihoods.R b/tests/testthat/test-likelihoods.R index f205e08a..0d56dab1 100644 --- a/tests/testthat/test-likelihoods.R +++ b/tests/testthat/test-likelihoods.R @@ -224,10 +224,10 @@ test_that("test likelihood/RMSE calculations with BiomeE", { object = ll_values_BiomeE, # expected was generated with dput(ll_values_BiomeE) expected = c( - -2.02016968026715, - -2.23968996093749, - -1.24162843355044, - -0.383538022003261 + -2.0202778978475, + -2.23976808695674, + -1.24193195159227, + -0.369097633033684 ) ) @@ -245,10 +245,10 @@ test_that("test likelihood/RMSE calculations with BiomeE", { # expected was generated with dput(relError_values_BiomeE) # NOTE: these errors are relative Errors, not RMSE: expected = c( - 0.435809001728683, - 0.174141992595677, - 0.152546040596932, - 0.316161901910987 + 0.42976158393698, + 0.168135096963972, + 0.152359273844623, + 0.316205527799935 ) ) }) diff --git a/tests/testthat/test-model-runs-snapshot-biomee.R b/tests/testthat/test-model-runs-snapshot-biomee.R index 06f0da52..ab4efc1c 100644 --- a/tests/testthat/test-model-runs-snapshot-biomee.R +++ b/tests/testthat/test-model-runs-snapshot-biomee.R @@ -246,11 +246,11 @@ test_that("Snapshot tests run_biomee_f_bysite()", { expect_snapshot_value_fmt(mod_BiomeE_PLULUC_primary_oat, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_primary_oac_yr1, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_primary_oac_yr2, tolerance = 0.01, cran = TRUE) - expect_snapshot_value_fmt(mod_BiomeE_PLULUC_primary_oac_yr251, tolerance = 0.01, cran = TRUE) + expect_snapshot_value_fmt(mod_BiomeE_PLULUC_primary_oac_yr251, tolerance = 0.085, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_odt_yr1, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_odt_yr251, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_oat, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_oac_yr1, tolerance = 0.01, cran = TRUE) expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_oac_yr2, tolerance = 0.01, cran = TRUE) - expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_oac_yr251, tolerance = 0.01, cran = TRUE) + expect_snapshot_value_fmt(mod_BiomeE_PLULUC_secondary_oac_yr251, tolerance = 0.085, cran = TRUE) }) diff --git a/tests/testthat/test-model-runs.R b/tests/testthat/test-model-runs.R index 394e217e..60681f3d 100644 --- a/tests/testthat/test-model-runs.R +++ b/tests/testthat/test-model-runs.R @@ -278,7 +278,8 @@ test_that("p-model onestep output check (run_pmodel_onestep_f_bysite())", { # NOTE: is now: (3.39e-6 g C m-2 s-1) # still slightly different from 3.16e-6, but remains within tolerance dplyr::select(-ns_star, -xi, -mj, -mc, -ci, -gpp, -ca, -gammastar, -kmm) |> - dplyr::select(vcmax, jmax, vcmax25, jmax25, chi, gs, iwue, rd) + dplyr::select(vcmax, jmax, vcmax25, jmax25, chi, gs, iwue, rd) |> + dplyr::select(-vcmax25, -jmax25) # NOTE: as long as rpmodel is not updated with Kumarathunge T-dependency, we can only compare vcmax and jmax resF_units_fixed <- resF |> dplyr::mutate( @@ -289,7 +290,8 @@ test_that("p-model onestep output check (run_pmodel_onestep_f_bysite())", { iwue = iwue, # NOTE: keep units as-is: (-) (computed as (ca-ci)/1.6/patm) rd = rd) |> # NOTE: keep units as-is: 3.16e-6 g C m-2 s-1 (computed as rd_to_vcmax*vcmax25*calc_ftemp_inst_rd(Temp)*c_molmass dplyr::select(-wscal, -gs_accl) |> - dplyr::select(vcmax, jmax, vcmax25, jmax25, chi, gs, iwue, rd) + dplyr::select(vcmax, jmax, vcmax25, jmax25, chi, gs, iwue, rd) |> + dplyr::select(-vcmax25, -jmax25) # NOTE: as long as rpmodel is not updated with Kumarathunge T-dependency, we can only compare vcmax and jmax # Now comparison must pass