From 6a11053addbbb3f82298ea77449f8f8a7638ff35 Mon Sep 17 00:00:00 2001 From: etowahadams Date: Tue, 3 Dec 2024 16:24:18 -0500 Subject: [PATCH] update features --- viz/src/SAEConfigs.ts | 42 +++++++++++++++--------------------------- 1 file changed, 15 insertions(+), 27 deletions(-) diff --git a/viz/src/SAEConfigs.ts b/viz/src/SAEConfigs.ts index fe798b9..459b3b5 100644 --- a/viz/src/SAEConfigs.ts +++ b/viz/src/SAEConfigs.ts @@ -98,12 +98,6 @@ export const SAE_CONFIGS: Record = { desc: "Activates on a single beta strand", group: "structural", }, - { - name: "alpha helix: first aa", - dim: 3451, - desc: "Activates on the first amino acid in a specific alpha helix", - group: "structural", - }, { name: "beta strand: first aa", dim: 782, @@ -122,6 +116,18 @@ export const SAE_CONFIGS: Record = { desc: "Activates on the turn between two alpha helices in ABC transporter proteins", group: "structural", }, + { + name: "alpha helices in TFs", + dim: 798, + desc: "Activates on alpha helices on transcription factors-like proteins", + group: "structural", + }, + { + name: "long alpha helices", + dim: 1008, + desc: "Activates on most amino acids in long alpha helices", + group: "structural", + }, { name: "leucine rich repeats", dim: 3425, @@ -340,27 +346,9 @@ export const SAE_CONFIGS: Record = { group: "alpha helix", }, { - name: "sporadic alpha helix", - dim: 4095, - desc: "Actives without a distinct pattern in alpha helices", - group: "alpha helix", - }, - { - name: "sporadic alpha helix", - dim: 2611, - desc: "Actives without a distinct pattern in alpha helices", - group: "alpha helix", - }, - { - name: "alpha helices in TFs", - dim: 798, - desc: "Activates on alpha helices on transcription factors-like proteins", - group: "alpha helix", - }, - { - name: "long alpha helices", - dim: 1008, - desc: "Activates on most amino acids in long alpha helices", + name: "first aa", + dim: 3451, + desc: "Activates on the first amino acid in short buried alpha helices", group: "alpha helix", }, {