setup.py

import sys

from pybind11 import get_cmake_dir
# Available at setup time due to pyproject.toml
from pybind11.setup_helpers import Pybind11Extension, build_ext
from setuptools import setup

__version__ = "0.2.4"

# The main interface is through Pybind11Extension.
# * You can add cxx_std=11/14/17, and then build_ext can be removed.
# * You can set include_pybind11=false to add the include directory yourself,
#   say from a submodule.
#
# Note:
#   Sort input source files if you glob sources to ensure bit-for-bit
#   reproducible builds (https://github.com/pybind/python_example/pull/53)

ext_modules = [
    Pybind11Extension("phylotrackpy.systematics",
        ["systematics_bindings.cpp"],
        # Example: passing in the version to the compiled code
        define_macros = [('VERSION_INFO', __version__), ("EMP_OPTIONAL_THROW_ON", 1)],
        cxx_std=20
        ),
]

setup(
    name="phylotrackpy",
    version=__version__,
    author="Emily Dolson",
    author_email="emilyldolson@gmail.com",
    url="https://github.com/emilydolson/python-phylogeny-tracker",
    description="A python phylogeny tracking module",
    ext_modules=ext_modules,
    extras_require={"test": "pytest"},
    # Currently, build_ext only provides an optional "highest supported C++
    # level" feature, but in the future it may provide more features.
    cmdclass={"build_ext": build_ext},
    zip_safe=False,
    python_requires=">=3.7",
    packages=['phylotrackpy']
)