Merge branch 'main' into slice

Author: Remi-Gau

src/defaults/defaultResultsStructure.m

@@ -23,4 +23,35 @@
 
   result.nidm = true();
 
+  % transparent plot
+  layers{1} = struct('color', struct('file', result.montage.background, ...
+                                     'range', [0 1], ...
+                                     'map', gray(256)));
+
+  %   color_map_folder = fullfile(fileparts(which('map_luminance')), '..', 'mat_maps');
+  %   load(fullfile(color_map_folder, 'diverging_bwr_iso.mat'));
+
+  layers{2} = struct('color', struct('file', [], ... % con image
+                                     'map', 'diverging_bwr_iso', ...
+                                     'range', [-4 4]), ...
+                     'label', '\beta_{listening} - \beta_{baseline} (a.u.)', ...
+                     'opacity', struct('file', [], ... % spmT image
+                                       'range', [2 3], ...
+                                       'label', '| t |'));
+
+  layers{3} = struct('color', struct('file', [], ... % spmT mask thresholded at 0.05 FWD
+                                     'map', [0 0 0], ...
+                                     'line_width', 2));
+
+  result.sdConfig.layers = layers;
+
+  settings = sd_config_settings('init');
+
+  settings.slice.orientation = result.montage.orientation;
+  settings.slice.disp_slices = -50:10:50;
+  settings.fig_specs.n.slice_column = 4;
+  settings.fig_specs.title = [];
+
+  result.sdConfig.settings = settings;
+
 end

tests/tests_defaults/test_defaultResultsStructure.m

@@ -37,6 +37,35 @@ function test_defaultResultsStructure_basic()
 
   expected.nidm = true();
 
+  layers{1} = struct('color', struct('file', expected.montage.background, ...
+                                     'range', [0 1], ...
+                                     'map', gray(256)));
+
+  layers{2} = struct('color', struct('file', [], ... % con image
+                                     'map', 'diverging_bwr_iso', ...
+                                     'range', [-4 4]), ...
+                     'label', '\beta_{listening} - \beta_{baseline} (a.u.)', ...
+                     'opacity', struct('file', [], ... % spmT image
+                                       'range', [2 3], ...
+                                       'label', '| t |'));
+
+  layers{3} = struct('color', struct('file', [], ... % spmT mask thresholded at 0.05 FWD
+                                     'map', [0 0 0], ...
+                                     'line_width', 2));
+
+  expected.sdConfig.layers = layers;
+
+  settings = sd_config_settings('init');
+
+  settings = sd_config_settings('init');
+
+  settings.slice.orientation = expected.montage.orientation;
+  settings.slice.disp_slices = -50:10:50;
+  settings.fig_specs.n.slice_column = 4;
+  settings.fig_specs.title = [];
+
+  expected.sdConfig.settings = settings;
+
   assertEqual(results, expected);
 
 end