From 5686d65067dab1367f820da6f6dddcad7a1ebba8 Mon Sep 17 00:00:00 2001 From: Pedro Mendes Date: Wed, 30 Oct 2024 10:48:15 -0400 Subject: [PATCH] all links to examples folder --- UserManual.md | 10 +++++----- 1 file changed, 5 insertions(+), 5 deletions(-) diff --git a/UserManual.md b/UserManual.md index 721deb0..e49b51f 100644 --- a/UserManual.md +++ b/UserManual.md @@ -9,11 +9,11 @@ For a full set of options run `sbmodelr --help` on the command line. The rest of this document describes the many options that are available in *sbmodelr*, but specific examples of usage are provided in the `examples` folder, which illustrate real-world usage of this tool, mostly replicating existing modeling papers. The examples are: - [Cells in a medium](examples/Cells_in_medium) - - Row of cells with gap junctions - - Array of oscillating cells - - Neuron networks I: small(ish) networks using a Hodgkin-Huxley-type model - - Neuron networks II: large networks using the Izhikevich model - - Gene regulatory networks: easy creation of large (or small) gene networks from a simple model file + - [Row of cells with gap junctions](examples/Row_of_cells_gap_junctions) + - [Array of oscillating cells](examples/Array_of_oscillating_cells) + - [Neuron networks I](examples/Neuron_networks_I): small(ish) networks using a Hodgkin-Huxley-type model + - [Neuron networks II](examples/Neuron_networks_II): large networks using the Izhikevich model + - [Gene regulatory networks](examples/Gene_Regulatory_Networks): easy creation of large (or small) gene networks from a simple model file ## Usage