msmbayes/NAMESPACE at master · chjackson/msmbayes · GitHub

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# Generated by roxygen2: do not edit by hand

S3method(logLik,msmbayes)
S3method(print,msmbayes)
S3method(summary,msmbayes)
S3method(summary,msmbres)
export(canpars_to_rates)
export(dnphase)
export(edf)
export(ematrix)
export(gamma_shape_in_bounds)
export(hnphase)
export(hr)
export(loghr)
export(loglik)
export(logoddsnext)
export(logrrnext)
export(logtaf)
export(mean_nphase)
export(mean_sojourn)
export(msmbayes)
export(msmbayes_prior_sample)
export(msmbayes_priorpred_sample)
export(msmhist)
export(msmhist_bardata)
export(msmprior)
export(n3_moment_bounds)
export(ncmoment_nphase)
export(nphase_Q)
export(phaseapprox_pars)
export(pmatrix)
export(pmatrixdf)
export(pnext)
export(pnphase)
export(qdf)
export(qmatrix)
export(qnphase)
export(qphaseapprox)
export(rates_to_canpars)
export(rnphase)
export(rrnext)
export(shape_ubound)
export(shapescale_to_rates)
export(sim_2state_smm)
export(skewness_nphase)
export(soj_prob)
export(soj_quantile)
export(standardise_to)
export(standardize_to)
export(statetable)
export(taf)
export(totlos)
export(var_nphase)
export(weibull_shape_in_bounds)
import(Rcpp)
import(methods)
import(vctrs)
importFrom(RcppParallel,RcppParallelLibs)
importFrom(abind,abind)
importFrom(cli,cli_abort)
importFrom(cli,cli_inform)
importFrom(cli,cli_progress_bar)
importFrom(cli,cli_progress_done)
importFrom(cli,cli_progress_update)
importFrom(cli,cli_warn)
importFrom(cli,qty)
importFrom(dplyr,across)
importFrom(dplyr,all_of)
importFrom(dplyr,any_of)
importFrom(dplyr,arrange)
importFrom(dplyr,everything)
importFrom(dplyr,filter)
importFrom(dplyr,full_join)
importFrom(dplyr,group_by)
importFrom(dplyr,if_else)
importFrom(dplyr,inner_join)
importFrom(dplyr,join_by)
importFrom(dplyr,left_join)
importFrom(dplyr,matches)
importFrom(dplyr,mutate)
importFrom(dplyr,n)
importFrom(dplyr,pull)
importFrom(dplyr,relocate)
importFrom(dplyr,rename)
importFrom(dplyr,row_number)
importFrom(dplyr,select)
importFrom(dplyr,slice)
importFrom(dplyr,summarise)
importFrom(dplyr,ungroup)
importFrom(expm,expm)
importFrom(ggplot2,aes)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_density)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guide_legend)
importFrom(ggplot2,guides)
importFrom(ggplot2,margin)
importFrom(ggplot2,theme)
importFrom(ggplot2,xlab)
importFrom(ggplot2,ylab)
importFrom(glue,glue)
importFrom(posterior,"%**%")
importFrom(posterior,as_draws)
importFrom(posterior,as_draws_matrix)
importFrom(posterior,draws_of)
importFrom(posterior,ess_bulk)
importFrom(posterior,is_rvar)
importFrom(posterior,merge_chains)
importFrom(posterior,ndraws)
importFrom(posterior,rdo)
importFrom(posterior,rfun)
importFrom(posterior,rhat)
importFrom(posterior,rvar)
importFrom(posterior,rvar_apply)
importFrom(posterior,rvar_sum)
importFrom(rlang,.data)
importFrom(rlang,caller_env)
importFrom(rstan,sampling)
importFrom(rstantools,rstan_config)
importFrom(stats,approx)
importFrom(stats,as.formula)
importFrom(stats,delete.response)
importFrom(stats,na.omit)
importFrom(stats,pexp)
importFrom(stats,plogis)
importFrom(stats,qlogis)
importFrom(stats,qnorm)
importFrom(stats,quantile)
importFrom(stats,relevel)
importFrom(stats,reshape)
importFrom(stats,rexp)
importFrom(stats,rnorm)
importFrom(stats,runif)
importFrom(stats,setNames)
importFrom(stats,terms)
importFrom(stringr,str_match)
importFrom(tidybayes,gather_rvars)
importFrom(tidybayes,tidy_draws)
importFrom(tidyr,pivot_longer)
importFrom(tidyr,pivot_wider)
importFrom(tidyr,replace_na)
importFrom(utils,head)
importFrom(utils,tail)
useDynLib(msmbayes, .registration = TRUE)