mkdocs.nav.yml

site_name: BioChatter

nav:
    - Home: index.md
    - Features:
          - Home: features/index.md
          - Basic Usage - Chat: features/chat.md
          - Retrieval-Augmented Generation: features/rag.md
          - API Calling: features/api.md
          - Reflexion via LangGraph: features/reflexion-agent.md
          - Open-source and Local LLMs: features/open-llm.md
          - LLM in your Browser - WebAssembly: features/wasm.md
          - The Living Benchmark: features/benchmark.md
          - Podcast my Paper: features/podcast.md
    - Benchmark:
          - Overview: benchmark/overview.md
          - All Results: benchmark/results.md
          - Developer Guide: benchmark/developer.md
    - Vignettes:
          - Home: vignettes/index.md
          - Knowledge Graph RAG: vignettes/kg.md
          - Retrieval-Augmented Generation (RAG): vignettes/rag.md
          - Customising BioChatter Light - Simple: vignettes/custom-bclight-simple.md
          - Customising BioChatter Light - Advanced: vignettes/custom-bclight-advanced.md
          - Customising BioChatter Light and Next - Cancer Genetics Use Case: vignettes/custom-decider-use-case.md
    - API Reference:
          - Home: api-docs/index.md
          - LLM Connectivity: api-docs/llm_connect.md
          - Vectorstore Agent: api-docs/vectorstore.md
          - Knowledge Graph Agent: api-docs/kg.md
          - "API Calling: Base Classes": api-docs/api-calling-base.md
          - "API Calling: Web APIs": api-docs/api-calling-web.md
          - "API Calling: Python APIs": api-docs/api-calling-python.md
          - Reflexion Agent: api-docs/reflexion.md
          - Podcast: api-docs/podcast.md