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Update README.md
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README.md

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@@ -256,13 +256,17 @@ If the run is successful, the -unique.fa FASTA output should contain 5 sequences
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2. Unzip all FASTA files
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(gunzip *.fa.gz) on unix
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Note: In version 1.3.4 and subsequent, unikseq-Bloom.pl supports .zip and .gz FASTA files directly (i.e., no need to uncompressed before running unikseq-Bloom.pl)
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Note: In version 1.3.4 and subsequent, unikseq-Bloom.pl supports .zip and .gz FASTA files directly (i.e., no need to uncompressed before running)
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3. Generate Bloom filters from in/outgroup (uncompressed) FASTA files
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3. Generate Bloom filters from in/outgroup FASTA files
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writeBloom.pl -f shark.fa
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writeBloom.pl -f teleost.fa
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---or---
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writeBloom.pl -f shark.fa.gz
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writeBloom.pl -f teleost.fa.gz
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These commands will write two output files:
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shark.fa_k25_p0.001_rolling.bloom

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