Error with collectInfo.sh #7
Description
./collectInfo.sh -i /path/to/BACTERIA/COLLECTED_INFO/VALID
-- COLLECTING INFO --
INFO: organism type flag -V not specified. O(thers) assumed (default option).
- PROCESSING DETAILS
INFO: processing NON virus data
INFO: filtering with DEFAULT match count threshold 5.
INFO: filtering terminated. Generating data Matrix
Processing sample IgG_S4, with total read counts: 571, valid reads: 571, others reads: 0
... finished.
Output files written in the directory:
/path/to/BACTERIA/COLLECTED_INFO/VALID
Processing sample IgG_S4, with total read counts: 571, valid reads: 571, others reads: 0
... finished.
Output files written in the directory:
/path/to/BACTERIA/COLLECTED_INFO/VALID
INFO: processing terminated. Generating HTML report
ERROR !! NO FILES IN THE DIRECTORY: /path/to/BACTERIA/COLLECTED_INFO/VALID/BACTERIA/COLLECTED_INFO
ERROR !! NO FILES IN THE DIRECTORY: /path/to/BACTERIA/COLLECTED_INFO/VALID/BACTERIA/COLLECTED_INFOINFO: processing terminated. Output files written in the dir /path/to/BACTERIA/COLLECTED_INFO/VALID/BACTERIA/HTML_REPORTS