Dockerfile.prod

FROM rocker/geospatial:4.5

# System dependencies
RUN apt-get update -qq && apt-get -y --no-install-recommends install \
    libxml2-dev \
    libcairo2-dev \
    libgit2-dev \
    default-libmysqlclient-dev \
    libpq-dev \
    libsasl2-dev \
    libsqlite3-dev \
    libssh2-1-dev \
    libnode-dev \
    unixodbc-dev \
    python3-dev \
    python3-pip \
    python3-venv && \
  rm -rf /var/lib/apt/lists/*

# Tell reticulate which Python to use — set after venv is created below
# (placeholder overridden by the ENV at the end of this file)

# Install R packages from CRAN
RUN install2.r --error --skipinstalled \
    arrow \
    config \
    dplyr \
    V8 \
    h3jsr \
    furrr \
    future \
    git2r \
    googleAuthR \
    googleCloudStorageR \
    httr2 \
    logger \
    magrittr \
    mongolite \
    parallel \
    purrr \
    readr \
    reticulate \
    rlang \
    sf \
    stringr \
    tidyr \
    remotes

# Install local package
COPY . /home
WORKDIR /home
RUN Rscript -e 'remotes::install_local(dependencies = TRUE)'

# Install ssfaitk into an isolated venv (avoids PEP 668 system-package restrictions)
RUN python3 -m venv /opt/ssfaitk && \
    /opt/ssfaitk/bin/pip install --upgrade pip setuptools wheel && \
    /opt/ssfaitk/bin/pip install "git+https://github.com/WorldFishCenter/ssf-ai-toolkit@plug-R"

# Point reticulate at the venv Python that has ssfaitk installed
ENV RETICULATE_PYTHON=/opt/ssfaitk/bin/python3

ENTRYPOINT ["Rscript"]