setup.py

"""
Setup for Aurora package. Basic call (install in editable mode)
pip install -e .

To install with a different Fortran compiler, use e.g.
python3 setup.py build --fcompiler=gnu95
or
python3 setup.py build --fcompiler=intelem 

It should be possible to pass any f2py flags via the command line, e.g. using
python3 setup.py build --fcompiler=intelem --opt="-fast"

"""

import setuptools
import os, sys, subprocess
from numpy.distutils.core import setup, Extension

package_name = "aurorafusion"


def get_version(relpath):
    """read version info from file without importing it"""
    from os.path import dirname, join

    for line in open(join(dirname(__file__), relpath)):
        if "__version__" in line:
            if '"' in line:
                return line.split('"')[1]
            elif "'" in line:
                return line.split("'")[1]


# with open('README.rst', 'r') as fh:
#    long_description = fh.read()
# long_description='See documentation at https://aurora-fusion.readthedocs.io'

####
with open("README.rst") as f:
    long_description = "\n" + "\n".join(f.read().strip().split("\n")[2:])

# Package adas_data and subdirectories together with license and readme
package_data = ["../USER_AGREEMENT.txt", "../README.rst", "*"]
for root, dir, files in os.walk("aurora"):
    if root == "aurora":
        continue
    if "__pycache__" in root:
        continue
    package_data.append(root[len("aurora") + 1 :] + os.sep + "*")

# For Fortran code:
wrapper = Extension(
    name="aurora._aurora",
    sources=[
        "aurora/main.f90",
        "aurora/grids.f90",
        "aurora/impden.f90",
        "aurora/math.f90",
    ],
)

install_requires = open("requirements.txt").read().split("\n")

setup(
    name=package_name,
    version=get_version("aurora/__init__.py"),
    description="Aurora package for particle transport, radiation and neutrals in magnetically-confined plasmas",
    long_description=long_description,
    # long_description_content_type='text/markdown',
    url="https://github.com/fsciortino/Aurora",
    author="F. Sciortino",
    author_email="sciortino@psfc.mit.edu",
    packages=["aurora"],
    keywords="particle and impurity transport, neutrals, radiation, magnetic confinement fusion",
    package_dir={"aurora": "aurora"},
    package_data={"aurora": package_data},
    data_files=[
        (
            "aurora_examples",
            [
                "examples/basic.py",
                "examples/frac_abundances.py",
                "examples/example.gfile",
                "examples/example.input.gacode",
            ],
        )
    ],
    install_requires=install_requires,
    ext_modules=[wrapper],
    classifiers=[
        "Programming Language :: Python :: 3",
        "Operating System :: OS Independent",
    ],
)