Attempt documentation update

Author: denis-yuen

.travis.yml

@@ -14,14 +14,14 @@ services:
 # encryption used for documentation key
 before_install:
 - docker pull seqware/seqware_test_environment:1.2
-- openssl aes-256-cbc -K $encrypted_b1a0a7dd1d17_key -iv $encrypted_b1a0a7dd1d17_iv -in id_seqware-jenkins-docker.enc -out id_seqware-jenkins-docker -d
+- openssl aes-256-cbc -K $encrypted_b1a0a7dd1d17_key -iv $encrypted_b1a0a7dd1d17_iv -in seqware_jenkins.id_rsa.enc -out seqware_jenkins.id_rsa -d
 
 script: 
 - docker run -h master -ti --rm -v $HOME/.m2:/home/seqware/.m2 -v $TRAVIS_BUILD_DIR:/home/seqware/gitroot/seqware seqware/seqware_test_environment:1.2 /test-start.sh "cd /home/seqware && sudo chown -R seqware:seqware . && cd /home/seqware/gitroot/seqware && cp .travis/settings ~/.seqware  && export MAVEN_OPTS=\"-Xmx2048m -XX:MaxPermSize=1024m\" && mvn -B clean install -DskipITs=false &&  cp seqware-pipeline/target/seqware ~/bin &&  mvn -B clean install -pl seqware-ext-testing -DskipITs=false -P 'extITs,embeddedTomcat'"
 
 after_success:
 - docker pull seqware/documentation_builder:1.2
-- docker run -v id_seqware-jenkins-docker:/root/.ssh/private_key.pem seqware/documentation_builder:1.2 sh -c 'chown -R root /root/.ssh && chmod -R 600 /root/.ssh/* && eval `ssh-agent -s`  && ssh-add ~/.ssh/id_rsa &&  git pull && git checkout develop && locale && export LC_ALL="en_US.UTF-8" && export LANG="en_US.UTF-8" && locale && mvn clean install -DskipTests && mvn site-deploy'
+- docker run -v $TRAVIS_BUILD_DIR/seqware_jenkins.id_rsa:/root/.ssh/private_key.pem seqware/documentation_builder:1.2 sh -c 'chown -R root $TRAVIS_BUILD_DIR &&  chown root /root/.ssh/private_key.pem && chmod -R 600 /root/.ssh/private_key.pem && eval `ssh-agent -s` && ssh-add /root/.ssh/private_key.pem && locale && export LC_ALL="en_US.UTF-8" && export LANG="en_US.UTF-8" && locale && mvn site-deploy'
 
 # sudo required for docker based testing
 sudo: required