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- Due by August 30, 2024•5/5 issues closed
Merge monai-generative components into the core
Due by August 16, 2024•3/3 issues closedPIC: Yucheng https://github.com/Project-MONAI/MONAI/issues/5800
Due by April 13, 2023•2/2 issues closedPIC: Nic/Peixin
Due by April 6, 2023PIC: Nic https://docs.google.com/spreadsheets/d/1SGJr-MOIMtZvB2eeCUTmTERF8I-7kV5yvSwFpCpIbfc/edit?usp=sharing
Due by January 23, 2023PIC: Dong/Andriy/Mingxin https://docs.google.com/spreadsheets/d/1ucAuOw_tkwhQoUaBLmSSB88YUtR3109FX6hXFI-3GSY/edit#gid=0
Due by April 6, 2023•58/58 issues closedPIC: Wenqi/Mikael https://github.com/Project-MONAI/MetricsReloaded
Due by March 23, 2023•4/4 issues closedPIC: Dong Enable MONAI user to use nnUNet
Due by March 20, 2023•3/3 issues closedPIC: Walter(KCL)/Eric(KCL) https://github.com/Project-MONAI/GenerativeModels KCL team is building the MONAI Generative module
Due by April 6, 2023PIC: Yiheng
Due by December 1, 2022PIC: Wenqi/Ben (KCL) https://github.com/Project-MONAI/MONAI/issues/4855
Due by April 6, 2023•9/9 issues closedPIC: Yiheng #3 in SurgToolLoc challenge in MICCAI 2022 video preprocessing components?
Due by December 1, 2022•1/1 issues closedPIC: Dong
Due by December 1, 2022PIC: Dong Auto3D enhancement
Due by December 1, 2022PIC: Andriy Auto3D solution wins Hector 2022 MICCAI challenge
Due by December 1, 2022•1/1 issues closedPIC: Bin Apply in bundles, workflow program, PyTorch program, etc. https://github.com/Project-MONAI/MONAI/issues/4903
Due by December 1, 2022•3/3 issues closedPIC: Wenqi
Due by December 1, 2022•4/4 issues closedPIC: Andriy
Due by December 1, 2022•1/1 issues closedPIC: Behrooz https://github.com/orgs/Project-MONAI/projects/11
No due date•2/2 issues closed- No due date•1/1 issues closed
PIC: Behrooz https://github.com/orgs/Project-MONAI/projects/11
Due by November 21, 2022•9/9 issues closed- Add multi-gpu training support to MonaiAlgo - Add federated statistics support
Due by October 24, 2022•6/6 issues closedPIC: Behrooz
Due by September 12, 2022•10/10 issues closedActive learning metrics being re-factored, these can directly be called to MONAI Label: - Variance (Options to return a 2D image, 3D image, single scalar value of mean/sum across entire image) - Entropy (Options to return a 2D image, 3D image, single scalar value of mean/sum across entire image) - Label Quality Assessment (Options to return a 2D image, 3D image, single scalar value of mean/sum across entire image)
Due by September 12, 2022•2/2 issues closedPIC: Wenqi fusing spatial transforms, one-step resampling, resampling with cucim backend the feature request for a more efficient `Compose` of spatial transforms, revisiting - https://github.com/Project-MONAI/MONAI/discussions/4198 - https://github.com/Project-MONAI/MONAI/issues/112 because with the metatensor, image data can now have additional states needed for lazy resampling
Due by September 12, 2022•1/2 issues closedPIC: Ahmed, BM Working Group TCIA; IDC (TME first)
Due by September 12, 2022PIC: Nic TBD---> P0 (Internal - Sept - Active Surgical); P0 ( External - Dec) With Bundles & Auto3D - Exp Management (model & experiments; not data) - AIM-MONAI ? https://aimstack.io/aim-monai-tutorial/; MLFlow. AI: Nic/Wenqi - Technical review solution, make a recommendation and internal sync... versioning/tracking needed (internal first - p0?) Considering Holoscan dev; with active surgical data coming in; exp mgmt internal first. Related ticket: https://github.com/Project-MONAI/tutorials/issues/817
Due by September 30, 2022•1/1 issues closedPIC: Yiheng Stretch Goal
Due by September 12, 2022PIC: Bin
Due by September 12, 2022•2/2 issues closedPIC: Bin MONAI to build streaming models for Holoscan, data loaders, 2D transforms, metrics, losses, network archs etc. Related tickets: https://github.com/Project-MONAI/MONAI/issues/4746
Due by September 12, 2022•2/2 issues closedPIC: Dong/Mingxin Ease of use to build near SOTA 3D Segm models. Development plan for the first release: https://github.com/Project-MONAI/MONAI/issues/4743
Due by September 12, 2022•13/13 issues closedPIC: Daguang Crucial establish MONAI as standard of research tool. Reach out to best paper winners from MIDL, Challenges, reputed researchers etc. Let's build a wishlist of papers and models we wan to include ? MONAI Model Zoo is a webpage hosting and publishing MONAI Bundles (with/without pre-trained weights) Research contribution in repo (MIDL Best Papers; Challenges) External contributions & core dev PIC. Top 10-20 wishlist from research WG. Visbility, ease of integration & marketing for researchers. Researchers can take their work and make it real world usability. AI Daguang: Wishlist with Michael; AI Prerna: Value prop of bundles for producers/creators of bundles. AI: Yucheng/Wenqi/Nic/Daguang sync vanderbilt - Let's tech...
Due by September 12, 2022•2/2 issues closedPIC: Holger Make it intuitive and seamless for MONAI to be extended to FL. Focus on client side integrations first. Create components to allow running MONAI pipelines in any FL framework. Suggesting to create a new folder (i.e., `monai/fl`) containing the following subfolders and objects: `client`: ClientAlgo base class MONAIAlgo reference implementation that can parse MONAI bundle configuration files `utils`: ExchangeObject, Filters and other helper/utility classes.
Due by September 12, 2022•21/21 issues closedPIC: Can
Due by September 12, 2022•8/8 issues closedPIC: Wenqi request from KCL- nice to have
No due date•2/2 issues closedPIC: Vish missing SSL functions
Due by June 1, 2022PIC: Andriy
Due by June 1, 2022PIC: Wenqi https://github.com/Project-MONAI/MONAI/issues/3333
Due by June 1, 2022•6/6 issues closedPIC: Ben/Eric/Yiheng
Due by June 1, 2022PIC: Dong Improving training convergence/performance of segmentation/annotation models
Due by June 1, 2022•2/3 issues closedPIC: Dong/Yufun Optimizing neural architecture and hyper-parameters jointly for comprehensive AutoML solutions with excellent performance
Due by June 1, 2022•0/3 issues closedPIC: Dong/Yufan Extended neural architecture search solutions to general 2D/3D medical imaging applications
Due by June 1, 2022•0/3 issues closedPIC: Nic ignite has some API (https://github.com/pytorch/ignite/issues/2011)
Due by June 1, 2022PIC: Ali SOTA on MSD, BTCV Datasets
Due by June 1, 2022•2/2 issues closedPIC: Prerna AWS/NCI; contributing data to MONAI; monai curator simplifies: miccai challenge <=> aws; may need a technical frontend support
Due by June 1, 2022PIC: Behrooz Right now, the pathology compoentns are under monai/apps but pathology is not an app with any definition. As disccused in our core meeting, we should either blend it into the rest of MONAI core or create a separate specialized module with pathollogy-specific components.
Due by June 1, 2022•21/21 issues closedPIC: Wenqi/Richard Cupy, Numpy, Tensor
Due by June 1, 2022PIC: Dong/ Can/ Michael
Due by June 1, 2022•46/46 issues closedPIC: Eric/Michael https://monai.io/started.html
Due by June 1, 2022PIC: Wenqi Changed from NGC to GitHub on 1/24
Due by June 1, 2022•2/2 issues closed