Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Regnet in pyro #10

Open
5 tasks
djinnome opened this issue May 25, 2023 · 1 comment
Open
5 tasks

Regnet in pyro #10

djinnome opened this issue May 25, 2023 · 1 comment
Assignees

Comments

@djinnome
Copy link
Member

djinnome commented May 25, 2023

  • Complete the Lotka-volterra dynamics
  • Open the repository
  • Start on Hill equation dynamics
  • Stretch goal: boolean regulatory network with priors over $2^{2^k}$ possible functions where $k$ is the number of parents
  • Super stretch goal: ternary regulatory network with priors over $3^{3^k}$ possible functions where $k$ is the number of parents
@djinnome djinnome self-assigned this May 25, 2023
@djinnome
Copy link
Member Author

djinnome commented Jun 1, 2023

Differences between SERGIO and Lotka-Volterra regnets

  1. Hill equation (SERGIO) vs 2nd order ODE
  2. stochastic differential equation (SERGIO) vs random differential equation (Lotka-volterra)

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant