From d876cd55e771e6c006b23417e987b82912478d95 Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 3 Feb 2025 20:25:56 +0000
Subject: [PATCH 1/2] [pre-commit.ci] pre-commit autoupdate
MIME-Version: 1.0
Content-Type: text/plain; charset=UTF-8
Content-Transfer-Encoding: 8bit

updates:
- [github.com/pre-commit/pre-commit-hooks: v4.0.1 → v5.0.0](https://github.com/pre-commit/pre-commit-hooks/compare/v4.0.1...v5.0.0)
- [github.com/asottile/pyupgrade: v2.26.0 → v3.19.1](https://github.com/asottile/pyupgrade/compare/v2.26.0...v3.19.1)
- https://github.com/asottile/reorder_python_imports → https://github.com/asottile/reorder-python-imports
- [github.com/asottile/reorder-python-imports: v2.6.0 → v3.14.0](https://github.com/asottile/reorder-python-imports/compare/v2.6.0...v3.14.0)
- [github.com/psf/black: 22.3.0 → 25.1.0](https://github.com/psf/black/compare/22.3.0...25.1.0)
- [github.com/asottile/blacken-docs: v1.12.1 → 1.19.1](https://github.com/asottile/blacken-docs/compare/v1.12.1...1.19.1)
- [github.com/PyCQA/flake8: 3.9.2 → 7.1.1](https://github.com/PyCQA/flake8/compare/3.9.2...7.1.1)
- [github.com/PyCQA/doc8: 0.9.0 → v1.1.2](https://github.com/PyCQA/doc8/compare/0.9.0...v1.1.2)
---
 .pre-commit-config.yaml | 16 ++++++++--------
 1 file changed, 8 insertions(+), 8 deletions(-)

diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
index db41843d4..ee9dcabb2 100644
--- a/.pre-commit-config.yaml
+++ b/.pre-commit-config.yaml
@@ -1,6 +1,6 @@
 repos:
 -   repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.0.1
+    rev: v5.0.0
     hooks:
     -   id: check-added-large-files
         args: ['--maxkb=100']
@@ -10,25 +10,25 @@ repos:
     -   id: debug-statements
     -   id: end-of-file-fixer
 -   repo: https://github.com/asottile/pyupgrade
-    rev: v2.26.0
+    rev: v3.19.1
     hooks:
     -   id: pyupgrade
         args: [--py36-plus]
--   repo: https://github.com/asottile/reorder_python_imports
-    rev: v2.6.0
+-   repo: https://github.com/asottile/reorder-python-imports
+    rev: v3.14.0
     hooks:
     -   id: reorder-python-imports
 -   repo: https://github.com/psf/black
-    rev: 22.3.0
+    rev: 25.1.0
     hooks:
     -   id: black
 -   repo: https://github.com/asottile/blacken-docs
-    rev: v1.12.1
+    rev: 1.19.1
     hooks:
     -   id: blacken-docs
         additional_dependencies: [black]
 -   repo: https://github.com/PyCQA/flake8
-    rev: 3.9.2
+    rev: 7.1.1
     hooks:
     -   id: flake8
         additional_dependencies: [
@@ -47,7 +47,7 @@ repos:
             Pygments,
         ]
 -   repo: https://github.com/PyCQA/doc8
-    rev: 0.9.0
+    rev: v1.1.2
     hooks:
     -   id: doc8
 # -   repo: https://github.com/codespell-project/codespell

From 9981b8e1d4e8774f238a2c0588a97d26505de8bf Mon Sep 17 00:00:00 2001
From: "pre-commit-ci[bot]"
 <66853113+pre-commit-ci[bot]@users.noreply.github.com>
Date: Mon, 3 Feb 2025 20:26:29 +0000
Subject: [PATCH 2/2] [pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci
---
 development/testing/regression.py               | 1 +
 development/testing/testing_pull_request.py     | 1 +
 docs/projects/_numerical_integration.py         | 1 +
 respy/__init__.py                               | 1 +
 respy/_numba.py                                 | 1 +
 respy/conditional_draws.py                      | 1 +
 respy/config.py                                 | 1 +
 respy/conftest.py                               | 1 +
 respy/data.py                                   | 1 +
 respy/exogenous_processes.py                    | 1 +
 respy/interface.py                              | 1 +
 respy/interpolate.py                            | 1 +
 respy/likelihood.py                             | 1 +
 respy/method_of_simulated_moments.py            | 1 +
 respy/parallelization.py                        | 1 +
 respy/pre_processing/data_checking.py           | 1 +
 respy/pre_processing/model_checking.py          | 1 +
 respy/pre_processing/model_processing.py        | 7 ++++---
 respy/pre_processing/process_covariates.py      | 1 +
 respy/shared.py                                 | 1 +
 respy/simulate.py                               | 1 +
 respy/solve.py                                  | 1 +
 respy/state_space.py                            | 1 +
 respy/tests/random_model.py                     | 1 +
 respy/tests/test_flexible_choices.py            | 1 +
 respy/tests/test_method_of_simulated_moments.py | 1 +
 respy/tests/test_model_processing.py            | 1 +
 respy/tests/test_randomness.py                  | 1 +
 respy/tests/test_regression.py                  | 1 +
 respy/tests/test_replication_kw_94.py           | 1 +
 respy/tests/test_simulate.py                    | 1 +
 setup.py                                        | 1 +
 32 files changed, 35 insertions(+), 3 deletions(-)

diff --git a/development/testing/regression.py b/development/testing/regression.py
index 05c5e6102..1b0103933 100644
--- a/development/testing/regression.py
+++ b/development/testing/regression.py
@@ -1,4 +1,5 @@
 """Create, run or investigate regression checks."""
+
 import pickle
 import socket
 
diff --git a/development/testing/testing_pull_request.py b/development/testing/testing_pull_request.py
index b0bc92def..e39b7eff8 100644
--- a/development/testing/testing_pull_request.py
+++ b/development/testing/testing_pull_request.py
@@ -1,4 +1,5 @@
 """Run a series of tests that are required for any pull request to be merged."""
+
 import socket
 
 import click
diff --git a/docs/projects/_numerical_integration.py b/docs/projects/_numerical_integration.py
index b1bfadc26..bb7bed46b 100644
--- a/docs/projects/_numerical_integration.py
+++ b/docs/projects/_numerical_integration.py
@@ -1,4 +1,5 @@
 """Auxiliary and plotting functions for the respy tutorial numerical integration."""
+
 import matplotlib.pyplot as plt
 from matplotlib import ticker
 
diff --git a/respy/__init__.py b/respy/__init__.py
index 343dad74a..66147dd52 100755
--- a/respy/__init__.py
+++ b/respy/__init__.py
@@ -9,6 +9,7 @@
     rp.<func>
 
 """
+
 import pytest
 
 from respy.config import ROOT_DIR
diff --git a/respy/_numba.py b/respy/_numba.py
index 93b9d50fd..bb55d9d31 100644
--- a/respy/_numba.py
+++ b/respy/_numba.py
@@ -1,4 +1,5 @@
 """Special functions for using numba."""
+
 import warnings
 
 import numba as nb
diff --git a/respy/conditional_draws.py b/respy/conditional_draws.py
index 52b313391..fd25832f1 100644
--- a/respy/conditional_draws.py
+++ b/respy/conditional_draws.py
@@ -1,4 +1,5 @@
 """Everything related to conditional draws for the maximum likelihood estimation."""
+
 import numpy as np
 from estimagic.utilities import robust_cholesky
 from numba import guvectorize
diff --git a/respy/config.py b/respy/config.py
index daf66830d..447d2bea1 100644
--- a/respy/config.py
+++ b/respy/config.py
@@ -1,4 +1,5 @@
 """General configuration for respy."""
+
 from pathlib import Path
 
 import numpy as np
diff --git a/respy/conftest.py b/respy/conftest.py
index d85201eb4..bbe244b07 100644
--- a/respy/conftest.py
+++ b/respy/conftest.py
@@ -1,4 +1,5 @@
 """This module includes code to configure pytest."""
+
 import os
 
 import numpy as np
diff --git a/respy/data.py b/respy/data.py
index 78642c4f7..979be88d1 100644
--- a/respy/data.py
+++ b/respy/data.py
@@ -1,4 +1,5 @@
 """Everything related to the original data from Keane and Wolpin (1997)."""
+
 import numpy as np
 import pandas as pd
 
diff --git a/respy/exogenous_processes.py b/respy/exogenous_processes.py
index f34b03c38..61a8c62ea 100644
--- a/respy/exogenous_processes.py
+++ b/respy/exogenous_processes.py
@@ -1,4 +1,5 @@
 """Utils for the inclusion of exogenous processes."""
+
 import functools
 
 import numpy as np
diff --git a/respy/interface.py b/respy/interface.py
index 1287e1296..39ed6cdbe 100644
--- a/respy/interface.py
+++ b/respy/interface.py
@@ -1,4 +1,5 @@
 """General interface functions for respy."""
+
 import warnings
 
 import pandas as pd
diff --git a/respy/interpolate.py b/respy/interpolate.py
index fb7977076..616231e87 100644
--- a/respy/interpolate.py
+++ b/respy/interpolate.py
@@ -1,4 +1,5 @@
 """This module contains the code for approximate solutions to the DCDP."""
+
 import warnings
 
 import numba as nb
diff --git a/respy/likelihood.py b/respy/likelihood.py
index 8c8947abf..944e9f746 100644
--- a/respy/likelihood.py
+++ b/respy/likelihood.py
@@ -1,4 +1,5 @@
 """Everything related to the estimation with maximum likelihood."""
+
 import warnings
 from functools import partial
 
diff --git a/respy/method_of_simulated_moments.py b/respy/method_of_simulated_moments.py
index 0d259f569..dd5d9680b 100644
--- a/respy/method_of_simulated_moments.py
+++ b/respy/method_of_simulated_moments.py
@@ -15,6 +15,7 @@
        of Asset Prices. Econometrica, 61(4), 929-952.
 
 """
+
 import copy
 import functools
 
diff --git a/respy/parallelization.py b/respy/parallelization.py
index b3cf7400a..09111e955 100644
--- a/respy/parallelization.py
+++ b/respy/parallelization.py
@@ -1,4 +1,5 @@
 """This module contains the code to control parallel execution."""
+
 import functools
 
 import joblib
diff --git a/respy/pre_processing/data_checking.py b/respy/pre_processing/data_checking.py
index 59f3f6a0b..bc361fcd2 100644
--- a/respy/pre_processing/data_checking.py
+++ b/respy/pre_processing/data_checking.py
@@ -1,4 +1,5 @@
 """Test functions to ensure the validity of data."""
+
 import numpy as np
 
 from respy.shared import generate_column_dtype_dict_for_estimation
diff --git a/respy/pre_processing/model_checking.py b/respy/pre_processing/model_checking.py
index 97ce3d90e..e0bf8baa0 100644
--- a/respy/pre_processing/model_checking.py
+++ b/respy/pre_processing/model_checking.py
@@ -1,4 +1,5 @@
 """Everything related to validate the model."""
+
 import numba as nb
 import numpy as np
 
diff --git a/respy/pre_processing/model_processing.py b/respy/pre_processing/model_processing.py
index fc6d08be7..0b764b99f 100644
--- a/respy/pre_processing/model_processing.py
+++ b/respy/pre_processing/model_processing.py
@@ -1,4 +1,5 @@
 """Process model specification files or objects."""
+
 import copy
 import itertools
 import os
@@ -802,9 +803,9 @@ def _convert_labels_in_formulas_to_codes(options, optim_paras):
 
     for choice in optim_paras["choices"]:
         for i, formula in enumerate(options["negative_choice_set"].get(choice, [])):
-            options["negative_choice_set"][choice][
-                i
-            ] = _replace_choices_and_observables_in_formula(formula, optim_paras)
+            options["negative_choice_set"][choice][i] = (
+                _replace_choices_and_observables_in_formula(formula, optim_paras)
+            )
 
     return options
 
diff --git a/respy/pre_processing/process_covariates.py b/respy/pre_processing/process_covariates.py
index b15b79534..036d3d638 100644
--- a/respy/pre_processing/process_covariates.py
+++ b/respy/pre_processing/process_covariates.py
@@ -1,4 +1,5 @@
 """This module comprises all functions which process the definition of covariates."""
+
 import copy
 
 
diff --git a/respy/shared.py b/respy/shared.py
index d49722083..7562db8dc 100644
--- a/respy/shared.py
+++ b/respy/shared.py
@@ -4,6 +4,7 @@
 import from respy itself. This is to prevent circular imports.
 
 """
+
 import shutil
 
 import numba as nb
diff --git a/respy/simulate.py b/respy/simulate.py
index 680e95cd9..f396f5236 100644
--- a/respy/simulate.py
+++ b/respy/simulate.py
@@ -1,4 +1,5 @@
 """Everything related to the simulation of data with structural models."""
+
 import functools
 import warnings
 
diff --git a/respy/solve.py b/respy/solve.py
index 76550da14..f6f505902 100644
--- a/respy/solve.py
+++ b/respy/solve.py
@@ -1,4 +1,5 @@
 """Everything related to the solution of a structural model."""
+
 import functools
 
 import numpy as np
diff --git a/respy/state_space.py b/respy/state_space.py
index dd7133b9c..75e76e798 100644
--- a/respy/state_space.py
+++ b/respy/state_space.py
@@ -1,4 +1,5 @@
 """Everything related to the state space of a structural model."""
+
 import itertools
 
 import numba as nb
diff --git a/respy/tests/random_model.py b/respy/tests/random_model.py
index 0af2a3237..5cdd460b3 100644
--- a/respy/tests/random_model.py
+++ b/respy/tests/random_model.py
@@ -1,4 +1,5 @@
 """This module contains the functions for the generation of random requests."""
+
 import collections
 import copy
 
diff --git a/respy/tests/test_flexible_choices.py b/respy/tests/test_flexible_choices.py
index 5200f1f79..cb3e72255 100644
--- a/respy/tests/test_flexible_choices.py
+++ b/respy/tests/test_flexible_choices.py
@@ -1,4 +1,5 @@
 """Contains code for testing for flexible choices."""
+
 import pandas as pd
 import pytest
 
diff --git a/respy/tests/test_method_of_simulated_moments.py b/respy/tests/test_method_of_simulated_moments.py
index 53f7698a5..d22e19f70 100644
--- a/respy/tests/test_method_of_simulated_moments.py
+++ b/respy/tests/test_method_of_simulated_moments.py
@@ -1,4 +1,5 @@
 """Test the msm interface of respy."""
+
 import copy
 
 import numpy as np
diff --git a/respy/tests/test_model_processing.py b/respy/tests/test_model_processing.py
index 60425d4c0..2f664644e 100644
--- a/respy/tests/test_model_processing.py
+++ b/respy/tests/test_model_processing.py
@@ -1,4 +1,5 @@
 """Test model generation."""
+
 import io
 import textwrap
 
diff --git a/respy/tests/test_randomness.py b/respy/tests/test_randomness.py
index 7d3cd0e63..ab413d0f2 100644
--- a/respy/tests/test_randomness.py
+++ b/respy/tests/test_randomness.py
@@ -1,4 +1,5 @@
 """This module includes test to specifically test that randomness is held constant."""
+
 import numpy as np
 import pytest
 
diff --git a/respy/tests/test_regression.py b/respy/tests/test_regression.py
index e442446c3..92bb64f09 100644
--- a/respy/tests/test_regression.py
+++ b/respy/tests/test_regression.py
@@ -1,4 +1,5 @@
 """Run a few regression tests."""
+
 import pickle
 
 import numpy as np
diff --git a/respy/tests/test_replication_kw_94.py b/respy/tests/test_replication_kw_94.py
index 19a3dc372..7f1dae9d8 100644
--- a/respy/tests/test_replication_kw_94.py
+++ b/respy/tests/test_replication_kw_94.py
@@ -23,6 +23,7 @@
        181.
 
 """
+
 import numpy as np
 import pandas as pd
 import pytest
diff --git a/respy/tests/test_simulate.py b/respy/tests/test_simulate.py
index b5a5421a0..f62ecb06d 100644
--- a/respy/tests/test_simulate.py
+++ b/respy/tests/test_simulate.py
@@ -1,4 +1,5 @@
 """Test the simulation routine."""
+
 import numpy as np
 import pandas as pd
 import pytest
diff --git a/setup.py b/setup.py
index eb7a57bd7..d32c58e21 100644
--- a/setup.py
+++ b/setup.py
@@ -1,4 +1,5 @@
 """The general package information for respy."""
+
 from pathlib import Path
 
 from setuptools import find_packages