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source/python-api/structure-generation/Using_BoltzGen.ipynb

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"tags": []
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},
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"source": [
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"[![Open In Colab](../../_static/colab-badge.svg)](https://colab.research.google.com/github/OpenProteinAI/openprotein-docs/blob/main/source/python-api/structure-generation/Using_RFdiffusion.ipynb)\n",
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"[![Get Notebook](../../_static/get-notebook-badge.svg)](https://raw.githubusercontent.com/OpenProteinAI/openprotein-docs/refs/heads/main/source/python-api/structure-generation/Using_RFdiffusion.ipynb)\n",
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"[![View In GitHub](../../_static/view-in-github-badge.svg)](https://github.com/OpenProteinAI/openprotein-docs/blob/main/source/python-api/structure-generation/Using_RFdiffusion.ipynb)\n",
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"[![Open In Colab](../../_static/colab-badge.svg)](https://colab.research.google.com/github/OpenProteinAI/openprotein-docs/blob/main/source/python-api/structure-generation/Using_BoltzGen.ipynb)\n",
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"[![Get Notebook](../../_static/get-notebook-badge.svg)](https://raw.githubusercontent.com/OpenProteinAI/openprotein-docs/refs/heads/main/source/python-api/structure-generation/Using_BoltzGen.ipynb)\n",
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"[![View In GitHub](../../_static/view-in-github-badge.svg)](https://github.com/OpenProteinAI/openprotein-docs/blob/main/source/python-api/structure-generation/Using_BoltzGen.ipynb)\n",
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"\n",
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"# Using BoltzGen\n",
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"This tutorial shows you how to use the RFdiffusion model to design novel\n",
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"This tutorial shows you how to use the BoltzGen model to design novel\n",
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"protein structures.\n",
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"\n",
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"The examples here are largely lifted from the [original\n",
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"documentation](https://github.com/RosettaCommons/RFdiffusion) but\n",
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"The examples here are mainly using those from the [original\n",
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"documentation](https://github.com/HannesStark/boltzgen) but\n",
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"adapted to show how it can be run using the OpenProtein platform, which\n",
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"can then be combined with our other workflows!\n",
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"\n",
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"Full credit for the examples and use cases go to the authors of\n",
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"RFdiffusion!\n",
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"Full credit for the examples and model go to the authors of\n",
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"boltzgen!\n",
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"\n",
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"## Unconditional monomer design\n",
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"\n",
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"The basic execution of RFdiffusion would be an unconditional design of a\n",
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"The basic execution of BoltzGen would be an unconditional design of a\n",
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"protein structure of a certain length. You would need 2 things:\n",
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"\n",
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"1. Length of the protein\n",

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