Command line tools throw GitPushError with message Working directory has staged changes

[nellh]

What went wrong?

It's possible for the local working copy to fail due to staged files.

Transferring annexed files 100.00%                                  87.5s 28/28
Pushing changes...
error: Uncaught (in worker "") (in promise) GitPushError: One or more branches were not updated:
  - refs/heads/main: Working directory has staged changes
    at _push (file:///.cache/deno/npm/registry.npmjs.org/isomorphic-git/1.27.1/index.js:12621:11)
    at Object.runMicrotasks (ext:core/01_core.js:685:26)
    at processTicksAndRejections (ext:deno_node/_next_tick.ts:59:10)
    at runNextTicks (ext:deno_node/_next_tick.ts:76:3)
    at eventLoopTick (ext:core/01_core.js:184:21)
    at async Object.push (file:///.cache/deno/npm/registry.npmjs.org/isomorphic-git/1.27.1/index.js:12701:12)
    at async push (https://jsr.io/@openneuro/cli/4.30.2/src/worker/git.ts:426:3)
    at async PromiseQueue.processQueue (https://jsr.io/@openneuro/cli/4.30.2/src/worker/queue.ts:17:24)
error: Uncaught (in promise) null etected 404 changes.

Expected behavior

This case should reset the local copy and retry this step instead of throwing this exception.

How to reproduce

Interrupt during commit creation while uploading with the command line tool.

Desktop

• OS:
• Browser:
• Version:

Phone

• Device:
• OS:
• Browser:
• Version:

Additional information

No response