[ci] fix the missing sys #38
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| name: Test JData | |
| on: [push] | |
| jobs: | |
| test: | |
| runs-on: ubuntu-22.04 | |
| strategy: | |
| matrix: | |
| python-version: ["3.7", "3.8", "3.9", "3.10", "3.11", "3.12", "3.13"] | |
| steps: | |
| - uses: actions/checkout@v3 | |
| - name: Set up Python ${{ matrix.python-version }} | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| - if: matrix.python-version == '3.7.17' | |
| run: | | |
| sudo ln -sf /usr/bin/python2.7 `which python` | |
| sudo ln -sf /usr/bin/pip2.7 `which pip` | |
| - name: Install dependencies | |
| run: | | |
| python -m pip install --upgrade pip | |
| pip install --force-reinstall --no-cache-dir --upgrade numpy backports.lzma setuptools h5py scipy bjdata | |
| if [ -f requirements.txt ]; then pip install -r requirements.txt; fi | |
| - name: Build sdist | |
| run: | | |
| python setup.py sdist | |
| - name: Basic test | |
| run: | | |
| python -m unittest discover -v test | |
| - name: Codec benchmark | |
| run: | | |
| pip install --upgrade bjdata lz4 | |
| cd benchmark | |
| python -m benchcodecs | |
| - name: NIfTI file loading benchmark | |
| run: | | |
| pip install --upgrade nibabel | |
| cd benchmark | |
| python -m benchnifti | |
| deploy: | |
| runs-on: ubuntu-22.04 | |
| needs: test | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v3 | |
| with: | |
| submodules: 'recursive' | |
| - name: Install build | |
| run: python3 -m pip install --upgrade build | |
| - name: Build wheel | |
| run: | | |
| python3 -m build | |
| - name: Check If the Build Version Exists on PyPI | |
| id: perform_pypi_upload_check | |
| shell: bash | |
| run: | | |
| $GITHUB_WORKSPACE/.github/check-pypi-upload.sh | |
| - name: Upload packages to PyPI | |
| uses: pypa/gh-action-pypi-publish@release/v1 | |
| if: ${{ github.actor == 'fangq' && steps.perform_pypi_upload_check.outputs.perform_pypi_upload == 1 && github.event_name != 'pull_request'}} | |
| with: | |
| password: ${{ secrets.PYPI_API_TOKEN }} | |
| verify_metadata: false | |
| verbose: true | |
| skip_existing: true |