Improve the error/warning message handling in RTOFS model (bugzilla #1131)

[DanIredell-NOAA]

http://www2.spa.ncep.noaa.gov/bugzilla/show_bug.cgi?id=1131

Improve the error/warning message handling in RTOFS model at next upgrade.

The fatal errors prefaced with ‘FATAL ERROR’ and non-fatal/warning errors prefaced with ‘WARNING’, please refer to https://www.nco.ncep.noaa.gov/idsb/implementation_standards/Implementation%20Standards%20v10.2.pdf? , page 11, section "Descriptive error messages".

[DanIredell-NOAA]

Adding FATAL ERROR to all messages that will cause the simulation to stop.
Adding WARNING to non-failure messages.

[DanIredell-NOAA]

NCO:
This issue has been fixed in the scripts below -

• ush/rtofs_atmforcing_correct.sh, rtofs_atmforcing.sh, rtofs_prestaging.sh, rtofs_atmforcing_stage.sh, rtofs_ncoda_amsr_qc.sh, rtofs_ncoda_goes_qc.sh, rtofs_ncoda_himawari_qc.sh, rtofs_ncoda_ice_qc.sh, rtofs_ncoda_jpss_qc.sh, rtofs_ncoda_metop_qc.sh, rtofs_ncoda_npp_qc.sh, rtofs_ncoda_ssh_qc.sh, rtofs_ncoda_sss_qc.sh, rtofs_ncoda_vel_qc.sh, rtofs_prestaging.sh, rtofs_runstaging.sh,
• scripts/exrtofs_glo_analysis.sh, exrtofs_glo_forecast.sh, exrtofs_glo_incup.sh, exrtofs_glo_ncoda_glbl_var.sh, exrtofs_glo_ncoda_hycom_var.sh, exrtofs_glo_ncoda_polar_var.sh, exrtofs_glo_ncoda_qc.sh.

However, the following scripts can be improved to add ‘FATAL ERROR’ for fatal errors and ‘WARNING’ for non-fatal/warning errors in the messages -

• scripts/exrtofs_glo_grib2_post.sh: echo "Missing file $fn, will not be able to run" >> ${RUN}_${modID}.t${mycyc}z.nav.log
• scripts/exrtofs_glo_gzip.sh: echo " $tgzfile was not produced, exiting now."
• scripts/exrtofs_glo_gzip.sh: echo " $file missing, exiting now."
• scripts/exrtofs_glo_gzip.sh: echo " $tgzfile was not produced, exiting now."
• scripts/exrtofs_glo_gzip.sh: echo " $tgzfile was not produced, exiting now."
• scripts/exrtofs_glo_gzip.sh: echo "Cycle not recognized RTOFS GZIP JOB, NO GZIPPED FILES ALERTED"
• scripts/exrtofs_glo_post_2.sh: echo "Missing file $fn, will not be able to run" >> ${RUN}_${modID}.t${mycyc}z.nav.log
• scripts/exrtofs_glo_post.sh: echo Post timed out, arfile_tplate not available after $icnt_max iterations.
• scripts/exrtofs_glo_post.sh: echo Missing file $fn, will not be able to run
• ush/rtofs_atmforcing_getges.sh: echo getges.sh: filetype $typef or resolution $resol not recognized >&2
• ush/rtofs_ncoda_amsr_qc.sh: echo "AMSR.obs_control file will not be updated"
• ush/rtofs_ncoda_goes_qc.sh: echo "GOES.obs_control file will not be updated"
• ush/rtofs_ncoda_himawari_qc.sh: echo "HIMAWARI.obs_control file will not be updated"
• ush/rtofs_ncoda_ice_qc.sh: echo "SSMI.obs_control file will not be updated"
• ush/rtofs_ncoda_ice_qc.sh: echo "AMSR_ICE.obs_control file will not be updated"
• ush/rtofs_ncoda_jpss_qc.sh: echo "JPSS_VIIRS.obs_control file will not be updated"
• ush/rtofs_ncoda_metop_qc.sh: echo "METOP.obs_control file will not be updated"
• ush/rtofs_ncoda_npp_qc.sh: echo "NPP_VIIRS.obs_control file will not be updated"
• ush/rtofs_ncoda_sss_qc.sh: echo "SSS.obs_control file will not be updated"

Please continue to improve the RTOFS scripts in the coming upgrade.