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[Source]: Pathogen Host Interactions Base (PHI-base) #227

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EmilyHaag opened this issue Jan 16, 2025 · 0 comments
Open
1 of 17 tasks

[Source]: Pathogen Host Interactions Base (PHI-base) #227

EmilyHaag opened this issue Jan 16, 2025 · 0 comments

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@EmilyHaag
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Source Name

Pathogen Host Interactions Base (PHI-base)

Source URL

http://www.phi-base.org/

Source Description

PHI-base is a curated database of information about experimentally verified interactions between pathogens (bacteria, fungi, viruses, and protists) and their host organisms. PHI-base was the first online resource devoted to the identification and presentation of information on fungal and oomycete pathogenicity genes and their host interactions. The database currently has data on 264 pathogens and 185 host species.

Source Access

No access issue, account not needed

Source Funding

Biotechnology and Biological Sciences Research Council (BBSRC, UK)

Source Relevance

PHI-base’s curated experimental data can help advance the understanding of infectious agents. It contains data on a wide variety of pathogens and their interactions with plant, animal, and human hosts. This data is valuable for IID researchers studying pathogen virulence, host resistance, immune evasion, and other areas.

Related WBS task

For internal use only. Assignee, please select the status of this issue

  • Not yet started
  • In process
  • Blocked
  • Will not include

Status Description

No response

Source to-do list

  • License check- Can this source be included?
  • Class check- Does this source have the right class of research output for inclusions?
  • NIAID Review- Does NIAID approve of the inclusion of this source?
  • Data access check- Have data access issues been resolved?
  • Structured data check- Does this source have structured data?
  • Mapping check- Has the properties from this source been mapped to the schema?
  • Parser check- Has the parser been written?
  • Parsed data check- Has a sanity check on the data obtained from this source been performed?
  • Merge data- Has the crawler/plugin been successfully integrated with the system?
  • Issues could not be resolved - Add as a single record via the DDE
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