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[Metadata Improvement]: Run EXTRACT pipeline on bio.tools #224

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gtsueng opened this issue Jan 13, 2025 · 0 comments
Open
2 of 17 tasks

[Metadata Improvement]: Run EXTRACT pipeline on bio.tools #224

gtsueng opened this issue Jan 13, 2025 · 0 comments
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enhancement New feature or request

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@gtsueng
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gtsueng commented Jan 13, 2025

Issue Name

Run EXTRACT pipeline on bio.tools

Issue Description

We were unable to map any fields to species, infectiousAgent, and healthcondition for bio.tools, although some records have such information in the name, description, keywords. Run the EXTRACT pipeline on bio.tools records to augment this metadata wherever possible.

Issue Discussion

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Please select the type of metadata improvement

  • Standardization (normalizing free text to an ontology)
  • Augmentation (adding values for metadata fields missing values)
  • Clean up (addressing redundancy or messy metadata)
  • Structure (changing the structuring of the metadata to support front end UI features)

Meta URL

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Related WBS task

https://github.com/NIAID-Data-Ecosystem/nde-roadmap/issues/13

For internal use only. Assignee, please select the status of this issue

  • Not yet started
  • In progress
  • Blocked
  • Will not address

Status Description

No response

Request status check list

  • This metadata improvement has yet to be discussed between NIAID, Scripps, Leidos
  • This metadata improvement does not need to be discussed between NIAID, Scripps, Leidos
  • This metadata improvement has been discussed/reported between NIAID, Scripps, Leidos
  • This metadata improvement has been implemented locally to generate data for review
  • This metadata improvement has been implemented on Dev
  • This metadata improvement has been implemented on Dev and the results have been reviewed and approved for staging
  • This metadata improvement has been implemented on Staging
  • This page/documentation/change has been approved for Production
  • This page/documentation/change has been implemented on Production
@gtsueng gtsueng added the enhancement New feature or request label Jan 13, 2025
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