ModernElectron
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@@ -76,10 +76,11 @@ jobs:
       set -eu -o pipefail
       cat /proc/cpuinfo | grep "model name" | sort -u
       df -h
+      sudo apt update
       sudo apt install -y ccache curl gcc gfortran git g++ ninja-build \
         openmpi-bin libopenmpi-dev \
         libfftw3-dev libfftw3-mpi-dev libhdf5-openmpi-dev pkg-config make \
-        python3 python3-pip python3-venv python3-setuptools libblas-dev liblapack-dev
+        python3 python3-pandas python3-pip python3-venv python3-setuptools libblas-dev liblapack-dev
       ccache --set-config=max_size=10.0G
       python3 -m pip install --upgrade pip
       python3 -m pip install --upgrade setuptools
 
@@ -31,6 +31,7 @@ trim_trailing_whitespace = false
 indent_style = tab
 indent_size = unset
 
+
 [*.py]
 # isort config
 force_sort_within_sections = true
@@ -33,6 +33,14 @@ repos:
 #  - id: fix-encoding-pragma
 #    exclude: ^noxfile.py$
 
+# documentation files: .rst
+-   repo: https://github.com/pre-commit/pygrep-hooks
+    rev: v1.9.0
+    hooks:
+#    - id: rst-backticks
+    - id: rst-directive-colons
+    - id: rst-inline-touching-normal
+
 #- repo: https://github.com/asottile/pyupgrade
 #  rev: v2.29.0
 #  hooks:
 
@@ -103,6 +103,11 @@
         "name": "Myers, Andrew",
         "orcid": "0000-0001-8427-8330"
       },
+      {
+        "affiliation": "Lawrence Berkeley National Laboratory",
+        "name": "Rheaume, Tiberius",
+        "orcid": "0000-0002-6710-0650"
+      },
       {
         "affiliation": "Lawrence Berkeley National Laboratory",
         "name": "Rowan, Michael E.",
 
@@ -402,7 +402,7 @@ set(PYINSTALLOPTIONS "" CACHE STRING "Additional parameters to pass to `pip inst
 add_custom_target(install_pip
     ${CMAKE_COMMAND} -E env PYWARPX_LIB_DIR=${CMAKE_LIBRARY_OUTPUT_DIRECTORY} python3 -m pip wheel -v --use-feature=in-tree-build ${WarpX_SOURCE_DIR}
     COMMAND
-        python3 -m pip install --force-reinstall -v ${PYINSTALLOPTIONS} ${CMAKE_BINARY_DIR}/*whl
+        python3 -m pip install --force-reinstall --no-deps -v ${PYINSTALLOPTIONS} ${CMAKE_BINARY_DIR}/*whl
     WORKING_DIRECTORY
         ${CMAKE_BINARY_DIR}
     DEPENDS
 
@@ -113,7 +113,7 @@ Periodically commit your changes with
 The commit message (between quotation marks) is super important in order to follow the developments during code-review and identify bugs.
 A typical format is:
 
-.. code-block::
+.. code-block:: text
 
    This is a short, 40-character title
 
 
@@ -96,8 +96,6 @@ This is mostly implemented in ``Source/Parallelization``, see the following func
 
 .. doxygenfunction:: WarpX::SyncCurrent
 
-.. doxygenfunction:: interpolateCurrentFineToCoarse
-
 .. doxygenfunction:: WarpX::RestrictCurrentFromFineToCoarsePatch
 
 .. doxygenfunction:: WarpX::AddCurrentFromFineLevelandSumBoundary
@@ -112,11 +110,7 @@ General functions for filtering can be found in ``Source/Filter/``, where the ma
 Bilinear filter
 ~~~~~~~~~~~~~~~
 
-The multi-pass bilinear filter (applied on the current density) is implemented in ``Source/Filter/``, and class ``WarpX`` holds an instance of this class in member variable ``WarpX::bilinear_filter``. For performance reasons (to avoid creating too many guard cells), this filter is directly applied in communication routines, see
-
-.. doxygenfunction:: WarpX::AddCurrentFromFineLevelandSumBoundary
-
-and
+The multi-pass bilinear filter (applied on the current density) is implemented in ``Source/Filter/``, and class ``WarpX`` holds an instance of this class in member variable ``WarpX::bilinear_filter``. For performance reasons (to avoid creating too many guard cells), this filter is directly applied in communication routines, see ``WarpX::AddCurrentFromFineLevelandSumBoundary`` above and
 
 .. doxygenfunction:: WarpX::ApplyFilterandSumBoundaryJ
 
 
@@ -216,20 +216,20 @@ Python Bindings (Developers)
 
 .. code-block:: bash
 
-   python3 -m pip install --force-reinstall -v .
+   python3 -m pip install --force-reinstall --no-deps -v .
 
 Some Developers like to code directly against a local copy of AMReX, changing both code-bases at a time:
 
 .. code-block:: bash
 
-   WARPX_AMREX_SRC=$PWD/../amrex python3 -m pip install --force-reinstall -v .
+   WARPX_AMREX_SRC=$PWD/../amrex python3 -m pip install --force-reinstall --no-deps -v .
 
 Additional environment control as common for CMake (:ref:`see above <building-cmake-intro>`) can be set as well, e.g. ``CC``, `CXX``, and ``CMAKE_PREFIX_PATH`` hints.
 So another sophisticated example might be: use Clang as the compiler, build with local source copies of PICSAR and AMReX, support the PSATD solver, MPI and openPMD, hint a parallel HDF5 installation in ``$HOME/sw/hdf5-parallel-1.10.4``, and only build 3D geometry:
 
 .. code-block:: bash
 
-   CC=$(which clang) CXX=$(which clang++) WARPX_AMREX_SRC=$PWD/../amrex WARPX_PICSAR_SRC=$PWD/../picsar WARPX_PSATD=ON WARPX_MPI=ON WARPX_DIMS=3 CMAKE_PREFIX_PATH=$HOME/sw/hdf5-parallel-1.10.4:$CMAKE_PREFIX_PATH python3 -m pip install --force-reinstall -v .
+   CC=$(which clang) CXX=$(which clang++) WARPX_AMREX_SRC=$PWD/../amrex WARPX_PICSAR_SRC=$PWD/../picsar WARPX_PSATD=ON WARPX_MPI=ON WARPX_DIMS=3 CMAKE_PREFIX_PATH=$HOME/sw/hdf5-parallel-1.10.4:$CMAKE_PREFIX_PATH python3 -m pip install --force-reinstall --no-deps -v .
 
 Here we wrote this all in one line, but one can also set all environment variables in a development environment and keep the pip call nice and short as in the beginning.
 Note that you need to use absolute paths for external source trees, because pip builds in a temporary directory, e.g. ``export WARPX_AMREX_SRC=$HOME/src/amrex``.
 
@@ -6,7 +6,7 @@ Dependencies
 WarpX depends on the following popular third party software.
 Please see installation instructions below.
 
-- a mature `C++17 <https://en.wikipedia.org/wiki/C%2B%2B17>`__ compiler, e.g., GCC 7, Clang 6, NVCC 11.0, MSVC 19.15 or newer
+- a mature `C++17 <https://en.wikipedia.org/wiki/C%2B%2B17>`__ compiler, e.g., GCC 7, Clang 7, NVCC 11.0, MSVC 19.15 or newer
 - `CMake 3.18.0+ <https://cmake.org>`__
 - `Git 2.18+ <https://git-scm.com>`__
 - `AMReX <https://amrex-codes.github.io>`__: we automatically download and compile a copy of AMReX
@@ -74,7 +74,7 @@ If you also want to run runtime tests and added Python (``spack add python`` and
 
 .. code-block:: bash
 
-   python3 -m pip install matplotlib yt scipy numpy openpmd-api virtualenv
+   python3 -m pip install matplotlib yt scipy pandas numpy openpmd-api virtualenv
 
 If you want to run the ``./run_test.sh`` :ref:`test script <developers-testing>`, which uses our legacy GNUmake build system, you need to set the following environment hints after ``spack env activate warpx-dev`` for dependent software:
 
@@ -125,7 +125,7 @@ Without MPI:
 
 .. code-block:: bash
 
-   conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp openpmd-api python numpy scipy yt fftw matplotlib mamba ninja pip virtualenv
+   conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp openpmd-api python numpy pandas scipy yt fftw matplotlib mamba ninja pip virtualenv
    source activate warpx-dev
 
    # compile WarpX with -DWarpX_MPI=OFF
@@ -134,7 +134,7 @@ With MPI (only Linux/macOS):
 
 .. code-block:: bash
 
-   conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp "openpmd-api=*=mpi_openmpi*" python numpy scipy yt "fftw=*=mpi_openmpi*" matplotlib mamba ninja openmpi pip virtualenv
+   conda create -n warpx-dev -c conda-forge blaspp ccache cmake compilers git lapackpp "openpmd-api=*=mpi_openmpi*" python numpy pandas scipy yt "fftw=*=mpi_openmpi*" matplotlib mamba ninja openmpi pip virtualenv
    source activate warpx-dev
 
 For legacy ``GNUmake`` builds, after each ``source activate warpx-dev``, you also need to set:
@@ -152,7 +152,7 @@ Apt (Debian/Ubuntu)
 .. code-block:: bash
 
    sudo apt update
-   sudo apt install build-essential ccache cmake g++ git libfftw3-mpi-dev libfftw3-dev libhdf5-openmpi-dev libopenmpi-dev pkg-config python3 python3-matplotlib python3-numpy python3-pip python3-scipy python3-venv
+   sudo apt install build-essential ccache cmake g++ git libfftw3-mpi-dev libfftw3-dev libhdf5-openmpi-dev libopenmpi-dev pkg-config python3 python3-matplotlib python3-numpy python3-pandas python3-pip python3-scipy python3-venv
 
    # optional:
    # for CUDA, either install
 
@@ -28,6 +28,7 @@ HPC Systems
    hpc/perlmutter
    hpc/summit
    hpc/spock
+   hpc/crusher
    hpc/juwels
    hpc/lassen
    hpc/quartz