diff --git a/index.md b/index.md index 9397bcf8..357c4635 100644 --- a/index.md +++ b/index.md @@ -3,10 +3,13 @@ layout: lesson root: . --- -A lot of genomics analysis is done using command-line tools for three reasons: 1) you will often be working with a large number of files, -and working through the command-line rather than through a graphical user interface (GUI) allows you to automate repetitive tasks, 2) you +A lot of genomics analysis is done using command-line tools for three reasons: +1) you will often be working with a large number of files, +and working through the command-line rather than through a graphical user interface (GUI) allows you to automate repetitive tasks, +2) you will often need more compute power than is available on your personal computer, and connecting to and interacting with remote computers -requires a command-line interface, and 3) you will often need to customize your analyses and command-line tools often enable more +requires a command-line interface, and +3) you will often need to customize your analyses and command-line tools often enable more customization than the corresponding GUI tools (if in fact a GUI tool even exists). In a [previous lesson](http://www.datacarpentry.org/shell-genomics/), you learned how to use the bash shell to interact with your computer through a command line interface. In this @@ -26,4 +29,8 @@ use a variety of bioinformatic tools with confidence and greatly enhance your re > > This lesson also assumes some familiarity with biological concepts, including the structure of DNA, nucleotide abbreviations, and the > concept of genomic variation within a population. +> +> This lesson uses data hosted on an Amazon Machine Instance (AMI). Workshop participants will be given information on how +> to log-in to the AMI during the workshop. Learners using these materials for self-directed study will need to set up their own +> AMI. Information on setting up an AMI and accessing the required data is provided on the [Genomics Workshop setup page](http://www.datacarpentry.org/genomics-workshop/setup/). {: .prereq}