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Update 2.2.2_Viral_Taxonomy_and_Phylogeny_II.md
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_episodes/2.2.2_Viral_Taxonomy_and_Phylogeny_II.md

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@@ -186,7 +186,7 @@ One of the advantages of running geNomad is that it also outputs functional anno
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Now that we have results from many different tools and programs, we can build a table to compare and correlate them. You can build this table however you would like - using excel or python etc... If you are using python, I recommend using pandas [`df.merge`](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.merge.html) or [`df.join`](https://pandas.pydata.org/pandas-docs/stable/reference/api/pandas.DataFrame.join.html) methods for this task. You will likely need to use it multiple times. Here's a sample of the type of table you need to build:
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| Contig | Contig length (bp) | Coverage | Coverage | Coverage | Completeness | Contamination | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Taxonomy | Taxonomy | Host Prediction |
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| Contig | Contig length (bp) | Coverage| Completeness | Contamination | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Num Genes | Taxonomy | Taxonomy | Host Prediction |
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| -------- | ------------------ | -------- | -------- | -------- | ------------ | ------------- | --------- | --------- | --------- | ---------- | ---------- | ---------- | --------- | --------- | --------- | --------------------------------------------------------------- | --------------------------------------------------------------- | --------------- |
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| | | total | | | CheckV | CheckV | CheckV | Phannotate | Phannotate | Phannotate | GeNomad | GeNomad | GeNomad | vConTACT3 | GeNomad | |
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| | | | | | Total | Viral | Bacterial | Total | Viral | Bacterial | Total | Viral | Bacterial | | | |

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