Skip to content

Error when performing preprocessing #1

@jul-des

Description

@jul-des

When performing the preprocessing with the following command:

python3 preprocess.py --patients skull_stripped_images/raw/ --preprocess_steps prepare_without_brain_extraction remove_bias normalize -cs -m t1 flair -cfg config_vtest.yml

I get the error message

Traceback (most recent call last):
File "MM_StrokeNet/test_mode/preprocess.py", line 36, in
task_name = args.task_name or utils.get_next_task_name(display_new_task_name='install' in preprocess_steps or 'plan' in preprocess_steps)
File "MM_StrokeNet/test_mode/core/utils.py", line 212, in get_next_task_name
task_number = int(get_last_task_id()) + 1
ValueError: invalid literal for int() with base 10: ''

Do you have any fixes for this problem?
Thanks in advance,
Julian

Metadata

Metadata

Assignees

No one assigned

    Labels

    No labels
    No labels

    Projects

    No projects

    Milestone

    No milestone

    Relationships

    None yet

    Development

    No branches or pull requests

    Issue actions