smudgeplot hetmers creates unspecific temporary files precluding parallel runs

[alxsimon]

Hi,

If I'm not mistaken the hetmers function produces temporary files such as .trim.ktab that are not using a prefix.

I think this is problematic when using smudgeplot in pipelines such as snakemake when running several instances in parallel.

Could the -o prefix option also be used when generating temp files?

Thanks

[KamilSJaron]

@thegenemyers I think this is a bad idea - to give the temporary dotted file a prefix.