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Copy pathsetup.py
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47 lines (42 loc) · 1.4 KB
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# BETA
import os
from setuptools import setup, find_packages
# Convert README.md to README.rst automagically
# http://stackoverflow.com/a/23265673
try:
from pypandoc import convert
read_md = lambda f: convert(f, 'rst')
except ImportError:
print("warning: pypandoc module not found, could not convert Markdown to RST")
read_md = lambda f: open(f, 'r').read()
here = os.path.abspath(os.path.dirname(__file__))
README = open(os.path.join(here, 'README.md')).read()
CHANGES = '' # open(os.path.join(here, 'CHANGES.md')).read()
setup(
name='jamtools',
version='1.0',
description='methtuple',
long_description=read_md('README.md'),
license='MIT',
classifiers=[
"Programming Language :: Python :: 2.7",
"Programming Language :: Python :: 3.2",
"Programming Language :: Python :: 3.4",
'Programming Language :: Python :: 3.4',
'Programming Language :: Python :: 3.5',
"License :: OSI Approved :: MIT License",
"Topic :: Scientific/Engineering :: Bio-Informatics",
],
author='Jack Duryea',
author_email='duryea@bcm.edu',
url='https://github.com/Jdduryea/Jamtools/',
keywords='bisulfite sequencing methylation bismark bioinformatics samtools',
packages=find_packages(),
include_package_data=True,
zip_safe=False,
install_requires=['pysam >= 0.8.4', 'matplotlib >= 2.0.0'],
test_suite="methtuple.tests",
scripts = [
'methtuple/scripts/methtuple'
]
)