isa-tab/a_assay_soapdenovo2.txt

Sample Name	Protocol REF	Extract Name	Protocol REF	Parameter Value[library source]	Parameter Value[library strategy]	Parameter Value[library selection]	Parameter Value[library layout]	Protocol REF	Parameter Value[sequencing instrument]	Assay Name	Comment[Export]	Raw Data File	Protocol REF	"Parameter Value[sequence assembly algorithm,http://purl.obolibrary.org/obo/OBI_0001522,OBI]"	Term Source REF	Term Accession Number	Parameter Value[workflow engine]	Term Source REF	Term Accession Number	Parameter Value[workflow]	Term Source REF	Term Accession Number	Parameter Value[Galaxy history]	Term Source REF	Term Accession Number	Parameter Value[Galaxy workflow file]	Term Source REF	Term Accession Number	Data Transformation Name	Derived Data File	Comment[Derived Data File information]	Protocol REF	Data Transformation Name	Derived Data File	Factor Value[sequence assembly algorithm]	Term Source REF	Term Accession Number	Factor Value[genome size]	Term Source REF	Term Accession Numberassemblathon-bacteria	mock extraction	assemblathon-bacteria	mock library construction					mock sequencing		assemblathon-bacteria	no	ftp://ftp.ncbi.nih.gov/genomes/Bacteria/all.fna.tar.gz	soapdenovo2-sequence assembly	SOAPdenovo version 2			Galaxy												DT1	T1	http://www.gigasciencejournal.com/content/1/1/18/table/T1	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		assemblathon-bacteria	mock extraction	assemblathon-bacteria	mock library construction					mock sequencing		assemblathon-bacteria	no	ftp://ftp.ncbi.nih.gov/genomes/Bacteria/all.fna.tar.gz	soapdenovo1-sequence assembly	SOAPdenovo version 1			Galaxy												DT1	T1	http://www.gigasciencejournal.com/content/1/1/18/table/T1	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		assemblathon-bacteria	mock extraction	assemblathon-bacteria	mock library construction					mock sequencing		assemblathon-bacteria	no	ftp://ftp.ncbi.nih.gov/genomes/Bacteria/all.fna.tar.gz	ALLPATHS-LG-sequence assembly	ALLPATHS-LG			Galaxy												DT1	T1	http://www.gigasciencejournal.com/content/1/1/18/table/T1	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Homo sapiens reference genome	mock extraction	Homo sapiens reference genome	mock library construction					mock sequencing		GCA_000001405.1	no	ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/chromFa.tar.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2.fq.gz	soapdenovo2-h-sapiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT4.Hs.SOAPdenovo2	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			large size		Homo sapiens reference genome	mock extraction	Homo sapiens reference genome	mock library construction					mock sequencing		GCA_000001405.1	no	ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/chromFa.tar.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1	yes	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2.fq.gz	soapdenovo1-h-sapiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT4.Hs.SOAPdenovo1	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			large size		Homo sapiens reference genome	mock extraction	Homo sapiens reference genome	mock library construction					mock sequencing		GCA_000001405.1	no	ftp://hgdownload.cse.ucsc.edu/goldenPath/hg19/bigZips/chromFa.tar.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110112_I199_FC819BBABXX_L3_HUMiqvDBTDWAAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L5_HUMiqvDBTDIAAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L6_HUMiqvDBTDIBAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L7_HUMiqvDBTDBAAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110114_I481_FC81C7HABXX_L8_HUMiqvDBTDBABPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I125_FC81C7KABXX_L3_HUMiqvDBTDLAAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_1.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		YH	nucleic acid extraction	YH	library construction	GENOMIC	OTHER	OTHER	PAIRED	nucleic acid sequencing	Illumina HiSeq 2000	110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2	no	ftp://climb.genomics.cn/pub/10.5524/100001_101000/100038/data/110115_I270_FC81CBVABXX_L5_HUMiqvDBTDBCAPE_2.fq.gz	ALLPATH-LG-h-sapiens-sequence assembly	ALLPATHS-LG			Galaxy												DT4.Hs.ALLPATH-LG	T4	http://www.gigasciencejournal.com/content/1/1/18/table/T4	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			large size		#																																								S.aureus reference genome	mock extraction	S.aureus reference genome	mock library construction					mock sequencing		NC_010079	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=161508266&extrafeat=0&maxplex=1	soapdenovo1-s-aureus-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo1.ga			DT2.Sa.SOAPdenovo1	http://gigagalaxy.net/datasets/61b51a387c27054a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_1.fastq.gz	soapdenovo1-s-aureus-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo1.ga			DT2.Sa.SOAPdenovo1	http://gigagalaxy.net/datasets/61b51a387c27054a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_2.fastq.gz	soapdenovo1-s-aureus-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo1.ga			DT2.Sa.SOAPdenovo1	http://gigagalaxy.net/datasets/61b51a387c27054a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_1.fastq.gz	soapdenovo1-s-aureus-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo1.ga			DT2.Sa.SOAPdenovo1	http://gigagalaxy.net/datasets/61b51a387c27054a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_2.fastq.gz	soapdenovo1-s-aureus-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo1.ga			DT2.Sa.SOAPdenovo1	http://gigagalaxy.net/datasets/61b51a387c27054a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		S.aureus reference genome	mock extraction	S.aureus reference genome	mock library construction					mock sequencing		NC_010079	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=161508266&extrafeat=0&maxplex=1	soapdenovo2-s-aureus-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-s-aureus-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo2.ga			DT2.Sa.SOAPdenovo2	http://gigagalaxy.net/datasets/241d84796a24640a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_1.fastq.gz	soapdenovo2-s-aureus-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-s-aureus-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo2.ga			DT2.Sa.SOAPdenovo2	http://gigagalaxy.net/datasets/241d84796a24640a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_2.fastq.gz	soapdenovo2-s-aureus-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-s-aureus-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo2.ga			DT2.Sa.SOAPdenovo2	http://gigagalaxy.net/datasets/241d84796a24640a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_1.fastq.gz	soapdenovo2-s-aureus-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-s-aureus-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo2.ga			DT2.Sa.SOAPdenovo2	http://gigagalaxy.net/datasets/241d84796a24640a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_2.fastq.gz	soapdenovo2-s-aureus-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-s-aureus-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_SOAPdenovo2.ga			DT2.Sa.SOAPdenovo2	http://gigagalaxy.net/datasets/241d84796a24640a	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		S.aureus reference genome	mock extraction	S.aureus reference genome	mock library construction					mock sequencing		NC_010079	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=161508266&extrafeat=0&maxplex=1	ALLPATH-LG-s-aureus-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-allpaths			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_ALLPATHS.ga			DT2.Sa.ALLPATH-LG	http://gigagalaxy.net/datasets/a32a1d9364c1b029	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_1.fastq.gz	ALLPATH-LG-s-aureus-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-allpaths			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_ALLPATHS.ga			DT2.Sa.ALLPATH-LG	http://gigagalaxy.net/datasets/a32a1d9364c1b029	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library1	mock library construction					mock sequencing		Staphylococcus_aureus-Library1	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/frag_2.fastq.gz	ALLPATH-LG-s-aureus-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-allpaths			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_ALLPATHS.ga			DT2.Sa.ALLPATH-LG	http://gigagalaxy.net/datasets/a32a1d9364c1b029	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_1.fastq.gz	ALLPATH-LG-s-aureus-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-allpaths			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_ALLPATHS.ga			DT2.Sa.ALLPATH-LG	http://gigagalaxy.net/datasets/a32a1d9364c1b029	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Staphylococcus_aureus	mock extraction	Staphylococcus_aureus-Library2	mock library construction					mock sequencing		Staphylococcus_aureus-Library2	no	http://gage.cbcb.umd.edu/data/Staphylococcus_aureus/Data.original/shortjump_2.fastq.gz	ALLPATH-LG-s-aureus-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-s-aureus-genome-assembly-using-allpaths			http://gigagalaxy.net/u/peterli/h/s-aureus-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_S._aureus_genome_using_ALLPATHS.ga			DT2.Sa.ALLPATH-LG	http://gigagalaxy.net/datasets/a32a1d9364c1b029	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		R.spaeroides reference genome	mock extraction	R.spaeroides reference genome	mock library construction					mock sequencing		CP000143	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=77386383&extrafeat=0&maxplex=1	soapdenovo1-r-sphaeroides-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-r-sphaeroides-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo1.ga			DT2.Rs.SOAPdenovo1	http://gigagalaxy.net/datasets/a1b6cce8a2380c73	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_1.fastq.gz	soapdenovo1-r-sphaeroides-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-r-sphaeroides-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo1.ga			DT2.Rs.SOAPdenovo1	http://gigagalaxy.net/datasets/a1b6cce8a2380c73	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_2.fastq.gz	soapdenovo1-r-sphaeroides-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-r-sphaeroides-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo1.ga			DT2.Rs.SOAPdenovo1	http://gigagalaxy.net/datasets/a1b6cce8a2380c73	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_1.fastq.gz	soapdenovo1-r-sphaeroides-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-r-sphaeroides-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo1.ga			DT2.Rs.SOAPdenovo1	http://gigagalaxy.net/datasets/a1b6cce8a2380c73	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_2.fastq.gz	soapdenovo1-r-sphaeroides-sequence assembly	SOAPdenovo version 1			Galaxy			http://gigagalaxy.net/u/peterli/w/workflow-constructed-from-history-r-sphaeroides-genome-assembly-using-soapdenovo1			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo1			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo1.ga			DT2.Rs.SOAPdenovo1	http://gigagalaxy.net/datasets/a1b6cce8a2380c73	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			small size		R.spaeroides reference genome	mock extraction	R.spaeroides reference genome	mock library construction					mock sequencing		CP000143	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=77386383&extrafeat=0&maxplex=1	soapdenovo2-r-sphaeroides-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo2.ga			DT2.Rs.SOAPdenovo2	http://gigagalaxy.net/datasets/32d48e3506ae8cf7	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_1.fastq.gz	soapdenovo2-r-sphaeroides-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo2.ga			DT2.Rs.SOAPdenovo2	http://gigagalaxy.net/datasets/32d48e3506ae8cf7	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_2.fastq.gz	soapdenovo2-r-sphaeroides-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo2.ga			DT2.Rs.SOAPdenovo2	http://gigagalaxy.net/datasets/32d48e3506ae8cf7	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_1.fastq.gz	soapdenovo2-r-sphaeroides-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo2.ga			DT2.Rs.SOAPdenovo2	http://gigagalaxy.net/datasets/32d48e3506ae8cf7	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_2.fastq.gz	soapdenovo2-r-sphaeroides-sequence assembly	SOAPdenovo version 2			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-soapdenovo2			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-soapdenovo2			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_SOAPdenovo2.ga			DT2.Rs.SOAPdenovo2	http://gigagalaxy.net/datasets/32d48e3506ae8cf7	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			small size		R.spaeroides reference genome	mock extraction	R.spaeroides reference genome	mock library construction					mock sequencing		CP000143	no	http://www.ncbi.nlm.nih.gov/sviewer/viewer.fcgi?tool=portal&sendto=on&log$=seqview&db=nuccore&dopt=fasta&val=77386383&extrafeat=0&maxplex=1	ALLPATH-LG-r-sphaeroides-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-allpaths			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_ALLPATHS.ga			DT2.Rs.ALLPATH-LG	http://gigagalaxy.net/datasets/eff20c5ba6bf6f87	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_1.fastq.gz	ALLPATH-LG-r-sphaeroides-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-allpaths			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_ALLPATHS.ga			DT2.Rs.ALLPATH-LG	http://gigagalaxy.net/datasets/eff20c5ba6bf6f87	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library1	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library1	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/frag_2.fastq.gz	ALLPATH-LG-r-sphaeroides-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-allpaths			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_ALLPATHS.ga			DT2.Rs.ALLPATH-LG	http://gigagalaxy.net/datasets/eff20c5ba6bf6f87	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_1.fastq.gz	ALLPATH-LG-r-sphaeroides-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-allpaths			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_ALLPATHS.ga			DT2.Rs.ALLPATH-LG	http://gigagalaxy.net/datasets/eff20c5ba6bf6f87	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Rhodobacter_sphaeroides	mock extraction	Rhodobacter_sphaeroides-Library2	mock library construction					mock sequencing		Rhodobacter_sphaeroides-Library2	no	http://gage.cbcb.umd.edu/data/Rhodobacter_sphaeroides/Data.original/shortjump_2.fastq.gz	ALLPATH-LG-r-sphaeroides-sequence assembly	ALLPATHS-LG			Galaxy			http://gigagalaxy.net/u/peterli/w/assembling-the-r-sphaeroides-genome-using-allpaths			http://gigagalaxy.net/u/peterli/h/r-sphaeroides-genome-assembly-using-allpaths			Galaxy-Workflow-Assembling_the_R._sphaeroides_genome_using_ALLPATHS.ga			DT2.Rs.ALLPATH-LG	http://gigagalaxy.net/datasets/eff20c5ba6bf6f87	http://www.gigasciencejournal.com/content/1/1/18/table/T2	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			small size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_1.fastq.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_2.fastq.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_1_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_2_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_1_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_2_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_1_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_2_sequence.txt.gz	soapdenovo1-b-impatiens-sequence assembly	SOAPdenovo version 1			Galaxy												DT3.Bi.SOAPdenovo2	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 2			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_1.fastq.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_2.fastq.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_1_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_2_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_1_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_2_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_1_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_2_sequence.txt.gz	soapdenovo2-b-impatiens-sequence assembly	SOAPdenovo version 2			Galaxy												DT3.Bi.ALLPATH-LG	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	ALLPATH-LG			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_1.fastq.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library1	mock library construction					mock sequencing		Bombus_impatiens_Library1	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/frag_2.fastq.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_1_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_1_2_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_1_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library2	mock library construction					mock sequencing		Bombus_impatiens_Library2	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_9_2_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_1_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		Bombus_impatiens	mock extraction	Bombus_impatiens_Library3	mock library construction					mock sequencing		Bombus_impatiens_Library3	no	http://gage.cbcb.umd.edu/data/Bombus_impatiens/Data.original/s_2_2_sequence.txt.gz	ALLPATH-LG-b-impatiens-sequence assembly	ALLPATHS-LG			Galaxy												DT3.Bi.SOAPdenovo1	T3	http://www.gigasciencejournal.com/content/1/1/18/table/T3	nanopublication	Nanopub	http://w3id.org/isa/soapdenovo2/nanopubs	SOAPdenovo version 1			medium size		