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platinum-resistance.json
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{
"$schema": "https://unpkg.com/@genome-spy/core/dist/schema.json",
"name": "platinum-resistance-genes",
"title": {
"text": "Platinum resistance genes",
"style": "track-title"
},
"description": "Huang, D., Savage, S.R., Calinawan, A.P. *et al*. A highly annotated database of genes associated with platinum resistance in cancer. *Oncogene* **40**, 6395–6405 (2021). https://doi.org/10.1038/s41388-021-02055-2",
"height": 12,
"data": { "url": "external-data/platinum-resistance.tsv" },
"layer": [
{
"data": { "values": [{}] },
"mark": {
"type": "rule",
"y": 0.5,
"color": "lightgray",
"strokeDash": [2, 5],
"tooltip": null
}
},
{
"mark": {
"type": "rect",
"minWidth": 2.0,
"minOpacity": 0.5,
"cornerRadius": 3,
"yOffset": -0.5
},
"encoding": {
"x": {
"chrom": "_chrom",
"pos": "_start",
"type": "locus",
"axis": null
},
"x2": { "chrom": "_chrom", "pos": "_end" },
"opacity": {
"field": "Scores",
"type": "quantitative",
"scale": {
"domain": [1, 5],
"range": [0.1, 1]
}
},
"color": {
"field": "Promotes res\\.",
"type": "nominal",
"scale": {
"domain": [
"DOWN",
"DOWN/methylated promoter",
"DOWN/PHOS",
"DOWN/stroma immune cells",
"DOWN/UP",
"DOWN/UP/cytoplasm",
"DOWN/UP/DEPHOS/mutation",
"DOWN/UP/PHOS",
"DOWN/UP/stroma immune cells/cancer cells",
"DOWN/UP/Ub",
"UP",
"UP/PHOS",
"UP/Ub",
"PHOS",
"UNKNOWN",
"CLEAVED TO ACTIVATE APOPTOSIS",
"DEPHOS/out of nuclear"
],
"range": [
"#3182bd",
"#3182bd",
"#3182bd",
"#3182bd",
"#808080",
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]
}
}
}
}
]
}