Update PyTMD reference to use JOSS #158
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| name: Run tests and checks | |
| on: | |
| push: | |
| branches: | |
| - main | |
| paths-ignore: | |
| - "paper/**" | |
| - "README.md" | |
| pull_request: | |
| types: [opened, synchronize, reopened] | |
| paths-ignore: | |
| - "paper/**" | |
| - "README.md" | |
| # Ensure only one test workflow runs per branch/PR at a time | |
| concurrency: | |
| group: ${{ github.ref }} # Group by branch or PR ref | |
| cancel-in-progress: true # Cancel any in-progress runs if a new one starts | |
| env: | |
| EO_TIDES_TIDE_MODELS: ./tests/data/tide_models | |
| jobs: | |
| quality: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out | |
| uses: actions/checkout@v4 | |
| - uses: actions/cache@v4 | |
| with: | |
| path: ~/.cache/pre-commit | |
| key: pre-commit-${{ hashFiles('.pre-commit-config.yaml') }} | |
| - name: Set up the environment | |
| uses: ./.github/actions/setup-python-env | |
| - name: Run checks | |
| run: make check | |
| run-tests: | |
| runs-on: ubuntu-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.10", "3.11", "3.12", "3.13"] | |
| resolution: ["highest", "lowest-direct"] | |
| exclude: # Temporarily excluded due to 3.13 only supported by Numpy >=2.0 | |
| - python-version: "3.13" | |
| resolution: "lowest-direct" | |
| fail-fast: false | |
| max-parallel: 10 | |
| defaults: | |
| run: | |
| shell: bash | |
| steps: | |
| - name: Check out | |
| uses: actions/checkout@v4 | |
| - name: Extract model data | |
| run: | | |
| # Extract tide modelling test files | |
| tar -xvzf ./tests/data/tide_models.tar.gz -C ./tests/data | |
| - name: Set up the environment | |
| uses: ./.github/actions/setup-python-env | |
| with: | |
| python-version: ${{ matrix.python-version }} | |
| resolution: ${{ matrix.resolution }} | |
| - name: Run Python unit tests | |
| timeout-minutes: 10 | |
| run: uv run python -m pytest tests --cov --cov-config=pyproject.toml --cov-report=xml --verbose | |
| - name: Run Jupyter Notebook integration tests | |
| timeout-minutes: 10 | |
| run: uv run python -m pytest --nbval-lax docs/notebooks/ | |
| - name: Check typing | |
| run: uv run mypy | |
| - name: Upload coverage reports to Codecov with GitHub Action on Python 3.10 | |
| uses: codecov/codecov-action@v4 | |
| if: ${{ matrix.python-version == '3.10' && matrix.resolution == 'highest' }} | |
| env: | |
| CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }} | |
| check-docs: | |
| runs-on: ubuntu-latest | |
| steps: | |
| - name: Check out | |
| uses: actions/checkout@v4 | |
| - name: Set up the environment | |
| uses: ./.github/actions/setup-python-env | |
| - name: Check if documentation can be built | |
| run: uv run mkdocs build -s |