Pipeline command line parameters display

[jennydaman]

On the "pipelines" page, the parameters are not shown correctly.

Expected:

-N3-distance 50 -resample-surfaces -mean-curvature -area-fhwm 10 -spawn -run -multispectral -spectral_mask

Actual:

 ---spawn  ---queue ' ' ---hosts ' ' ---qopts ' ' ---no-granular  ---granular  ---maxqueued ' ' ---mpi  ---no-mpi  ---sourcedir ' ' ---targetdir ' ' ---prefix ' ' ---id-subdir  ---id-file ' ' ---template ' ' ---model ' ' ---surfreg-model ' ' ---surface-atlas ' ' ---input_is_stx  ---noinput_is_stx  ---multispectral  ---correct-pve  ---no-correct-pve  ---mask-cerebellum  ---no-mask-cerebellum  ---subcortical  ---no-subcortical  ---calibrate-white  ---no-calibrate-white  ---spectral_mask  ---interp ' ' ---headheight ' ' ---N3-distance 50 ---N3-damping ' ' ---lsq6  ---lsq12  ---no-surfaces  ---hi-res-surfaces  ---mask-blood-vessels  ---no-mask-blood-vessel  ---mask-hippocampus  ---no-mask-hippocampus  ---thickness ' ' ---resample-surfaces  ---no-resample-surfaces  ---mean-curvature  ---no-mean-curvature  ---area-fwhm ' ' ---volume-fwhm ' ' ---combine-surfaces  ---no-combine-surfaces  ---VBM  ---no-VBM  ---VBM-fwhm ' ' ---VBM-symmetry  ---no-VBM-symmetry  ---VBM-cerebellum  ---no-VBM-cerebellum  ---run  ---status-from-files  ---print-stages  ---print-status  ---make-graph  ---make-filename-graph  ---print-status-report  ---reset-all  ---reset-from ' ' ---reset-after ' ' ---reset-to ' ' ---reset-running  ---no-reset-running 

[PintoGideon]

@jennydaman Where was this bug observed? chris.tch.harvard.edu?

[jennydaman]

Yes

…

On Tue, Jan 21, 2025 at 12:24, Gideon Pinto ***@***.***(mailto:On Tue, Jan 21, 2025 at 12:24, Gideon Pinto <<a href=)> wrote: ***@***.***(https://github.com/jennydaman) Where was this bug observed? chris.tch.harvard.edu? — Reply to this email directly, [view it on GitHub](#1295 (comment)), or [unsubscribe](https://github.com/notifications/unsubscribe-auth/AE3VRVZCLXJY7SWZE7HXXJ32LZ7EFAVCNFSM6AAAAABVPHNRFWVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMZDMMBVGMZTENJSG4). You are receiving this because you were mentioned.Message ID: ***@***.***>