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workflows/working_example/workflow/Snakefile

Lines changed: 1 addition & 1 deletion
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@@ -17,7 +17,7 @@ configfile: "config/config.yaml"
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# Rule to run the R script with the path parameter
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rule run_r_script:
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input:
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script = "epiestim_estimate_r.R"
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script = "workflow/epiestim_estimate_r.R"
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params:
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path = config["path"]
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out = config["out"]

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