In `src/SamSegmentMapper.cpp:226` it says ```c++ if (!chrConverter.isTechnical(alignment.getMateChrIndex()) && !(alignment.getMateChrIndex() == 2 && (alignment.getMatePos() / 10000 == 3314))) { ``` This seems like special code for hg37 ... 🤔
In
src/SamSegmentMapper.cpp:226it saysThis seems like special code for hg37 ... 🤔