[pre-commit.ci] auto fixes from pre-commit.com hooks

for more information, see https://pre-commit.ci

Author: pre-commit-ci[bot]

src/simcardems/benchmark.py

@@ -36,11 +36,11 @@ def to_string(x):
 
 
 def trace_path(outdir: str, dx: float, dt: float) -> Path:
-    return Path(outdir) / f"results_dx{int(100*dx)}_dt{int(1000*dt)}.npy"
+    return Path(outdir) / f"results_dx{int(100 * dx)}_dt{int(1000 * dt)}.npy"
 
 
 def feature_path(outdir: str, dx: float, dt: float) -> Path:
-    return Path(outdir) / f"results_dx{int(100*dx)}_dt{int(1000*dt)}.json"
+    return Path(outdir) / f"results_dx{int(100 * dx)}_dt{int(1000 * dt)}.json"
 
 
 def find_dx_dt(

src/simcardems/boundary_conditions.py

@@ -136,7 +136,7 @@ def create_lv_boundary_conditions(
     spring: typing.Union[dolfin.Constant, float] = None,
 ):
     logger.debug(
-        "Calling create_lv_boundary_conditions with geo: " f"{geo!r}, traction: {traction!r} and spring: {spring!r}",
+        f"Calling create_lv_boundary_conditions with geo: {geo!r}, traction: {traction!r} and spring: {spring!r}",
     )
 
     def dirichlet_bc(W):

src/simcardems/geometry.py

@@ -73,7 +73,7 @@ def refine_mesh(
 ) -> dolfin.Mesh:
     dolfin.parameters["refinement_algorithm"] = "plaza_with_parent_facets"
     for i in range(num_refinements):
-        logger.info(f"Performing refinement {i+1}")
+        logger.info(f"Performing refinement {i + 1}")
         mesh = dolfin.refine(mesh, redistribute=redistribute)
 
     return mesh

src/simcardems/runner.py

@@ -206,7 +206,7 @@ def solve(
             # Save state every 10 beats if simulation is longer than 40 sec
             if default_save_condition(i, T, self._dt):
                 self.coupling.save_state(
-                    path=self.outdir.joinpath(f"state_{int(i*self._dt/1000)}beat.h5"),
+                    path=self.outdir.joinpath(f"state_{int(i * self._dt / 1000)}beat.h5"),
                     config=self._config,
                 )