From 5fc69d21313651590514d862b75b23b16fbc8f82 Mon Sep 17 00:00:00 2001
From: peterpru <peter.pruisscher@scilifelab.se>
Date: Tue, 25 Nov 2025 11:27:40 +0100
Subject: [PATCH] add raredisease deepvariant reports to storing

---
 cg/resources/raredisease_bundle_filenames.yaml | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/cg/resources/raredisease_bundle_filenames.yaml b/cg/resources/raredisease_bundle_filenames.yaml
index eaae52fe8b..b5220e07f0 100644
--- a/cg/resources/raredisease_bundle_filenames.yaml
+++ b/cg/resources/raredisease_bundle_filenames.yaml
@@ -253,6 +253,11 @@
   path: PATHTOCASE/call_snv/genome/CASEID_snv.vcf.gz.tbi
   step: call_snv
   tag: call_snv_index
+- format: meta
+  id: SAMPLEID
+  path: PATHTOCASE/call_snv/genome/SAMPLEID_deepvar.visual_report.html
+  step: deepvariant
+  tag: report
 - format: vcf
   id: CASEID
   path: PATHTOCASE/call_snv/mitochondria/CASEID_mitochondria.vcf.gz