Adding MRCC5-CMIP6 dataset (#67)

* Adding untested script for the Ourano MRCC5-CMIP6 dataset

* Polishing up

* Resolving a bug missing files for time adjustment ncap2 script

* Polishing up

* Renaming iterative variables for consistency and taking care of dates for various scenarios

* Documentation for the MRCC5-CMIP6 dataset

* Optimizing parallelization scheme for MRCC5-CMIP6

* Updating with MRCC5-CMIP6 link

Author: kasra-keshavarz

README.md

@@ -52,7 +52,7 @@ Script options:
 |7 |ORNL Daymet                |Daily (Jan 1980 - Dec 2022)[^3] |10.3334/ORNLDAAC/2129     |[link](./scripts/ornl-daymet)        |
 |8 |Alberta Gov Climate Dataset|Daily (Jan 1950 - Dec 2100)     |10.5194/hess-23-5151-201  |[link](./scripts/ab-gov)             |
 |9 |Ouranos ESPO-G6-R2         |Daily (Jan 1950 - Dec 2100)     |10.1038/s41597-023-02855-z|[link](./scripts/ouranos-espo-g6-r2) |
-|10|Ouranos MRCC5-CMIP6        |hourly (Jan 1950 - Dec 2100)    |TBD                       |link                                 |
+|10|Ouranos MRCC5-CMIP6        |hourly (Jan 1950 - Dec 2100)    |TBD                       |[link](./scripts/ouranos-mrcc5-cmip6)|
 |11|NASA NEX-GDDP-CMIP6        |Daily (Jan 1950 - Dec 2100)     |10.1038/s41597-022-01393-4|[link](./scripts/nasa-nex-gddp-cmip6)|
 
 [^1]: For access to the files on Graham cluster, please contact [Stephen O'Hearn](mailto:[email protected]).

extract-dataset.sh

@@ -565,18 +565,18 @@ case "${dataset,,}" in
 
   # Ouranos-MRCC5-CMIP6 dataset
   "crcm5-cmip6" | "mrcc5-cmip6" | "crcm5" | "mrcc5" )
-    call_processing_func "$scriptPath/ouranos-mrcc5-cmip6/mrcc5-cmip6.sh" "1years"
+    call_processing_func "$scriptPath/ouranos-mrcc5-cmip6/mrcc5-cmip6.sh" "20years"
     ;;
 
   # Alberta Government Downscaled Climate Dataset - CMIP6
   "alberta" | "ab-gov" | "ab" | "ab_gov" | "abgov" )
     call_processing_func "$scriptPath/ab-gov/ab-gov.sh" "151years" "0"
-	;;
+    ;;
 
   # NASA GDDP-NEX-CMIP6
   "gddp" | "nex" | "gddp-nex" | "nex-gddp" | "gddp-nex-cmip6" | "nex-gddp-cmip6")
     call_processing_func "$scriptPath/nasa-nex-gddp-cmip6/nex-gddp-cmip6.sh" "100years" "0"
-	;;
+    ;;
 
   # CanRCM4-WFDEI-GEM-CaPA
   "canrcm4_g" | "canrcm4-wfdei-gem-capa" | "canrcm4_wfdei_gem_capa")

scripts/ouranos-espo-g6-r2/espo-g6-r2.sh

@@ -41,7 +41,7 @@ short_usage() {
 
 
 # argument parsing using getopt - WORKS ONLY ON LINUX BY DEFAULT
-parsedArguments=$(getopt -a -n extract-dataset -o i:v:o:s:e:t:l:n:p:c:m:S:M: --long dataset-dir:,variable:,output-dir:,start-date:,end-date:,time-scale:,lat-lims:,lon-lims:,prefix:,cache:,ensemble:,scenario:,model: -- "$@")
+parsedArguments=$(getopt -a -n espo-g6-r2 -o i:v:o:s:e:t:l:n:p:c:m:S:M: --long dataset-dir:,variable:,output-dir:,start-date:,end-date:,time-scale:,lat-lims:,lon-lims:,prefix:,cache:,ensemble:,scenario:,model: -- "$@")
 validArguments=$?
 if [ "$validArguments" != "0" ]; then
   short_usage;