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tests.txt
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174 lines (174 loc) · 6.54 KB
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#BridgeDbMappingsTests.all
#BridgeDbMappingsTests.hasSomeChemSpiderMappings
#BridgeDbMappingsTests.hasSomeEnsemblMappings
#BridgeDbMappingsTests.hasSomeEntrezGeneMappings
#BridgeDbMappingsTests.hasSomeHMDBMappings
#BridgeDbMappingsTests.hasSomeUniprotMappings
CASMetabolitesTests.all
#CASMetabolitesTests.deletedCASIdentifiers
#CASMetabolitesTests.outdatedIdentifiers
ChEBIMetabolitesTests.all
#ChEBIMetabolitesTests.chebiDataTypo
#ChEBIMetabolitesTests.faultyChEBIChEBIIdentifiers
#ChEBIMetabolitesTests.faultyChEBIIdentifiers
#ChEBIMetabolitesTests.neutralIons
#ChEBIMetabolitesTests.secondaryChEBIIdentifiers
ChemSpiderTests.all
#ChemSpiderTests.chemSpiderIDsNotNumbers
#ChemSpiderTests.outdatedIdentifiers
#CovidDiseaseMapsTests.all
#CovidDiseaseMapsTests.interactionsWithoutReferences
#CovidDiseaseMapsTests.missingHGNC
DataNodesTests.all
#DataNodesTests.dataNodesWithoutIdentifier
#DataNodesTests.otherDataSource
#DataNodesTests.unknownTypes
#DataNodesTests.unknownTypes_Reactome
#DataNodesTests.unknownTypes_knownDatasource
#EnsemblTests.all
#EnsemblTests.outdatedIdentifiers
EnsemblTests.wrongEnsemblIDForCowSpecies
EnsemblTests.wrongEnsemblIDForHumanSpecies
EnsemblTests.wrongEnsemblIDForMouseSpecies
EnsemblTests.wrongEnsemblIDForRatSpecies
GeneTests.all
#GeneTests.affyProbeIdentifiersNotCorrect
#GeneTests.entrezGeneIdentifiersNotNumber
#GeneTests.nonNumericHGNCAccessionNumbers
#GeneTests.numericHGNCIDs
#GeneTests.outdatedIdentifiers
#GeneralTests.all
GeneralTests.curationAndHypothetical
GeneralTests.curationAndNeedsWork
GeneralTests.curationAndReactome
GeneralTests.dataNodeWithoutGraphId
GeneralTests.duplicateTitles
GeneralTests.emptyDataSources
GeneralTests.emptyLabelOfNodeWithIdentifier
GeneralTests.groupsHaveDetail
GeneralTests.noTags
GeneralTests.nullDataSources
#GeneralTests.recentness
GeneralTests.stockComments
GeneralTests.titlesShortEnough
GeneralTests.undefinedDataSources
GeneralTests.undefinedIdentifier
GeneralTests.weirdCharacterTitles
#HMDBMetabolitesTests.all
#HMDBMetabolitesTests.correctFormat
HMDBMetabolitesTests.outdatedIdentifiers
HMDBSecMetabolitesTests.all
#HMDBSecMetabolitesTests.nonExisting
#HMDBSecMetabolitesTests.oldFormat
#HMDBSecMetabolitesTests.outdatedIdentifiers
IMDPathwayTests.all
#IMDPathwayTests.allMetabolitesInteract
#IMDPathwayTests.catalystsWithCommonDataSource
#IMDPathwayTests.diseasesHaveIdentifiers
#IMDPathwayTests.metabolicConversionIdentifiersCommon
#IMDPathwayTests.metabolicConversions
#IMDPathwayTests.omimIdentifiers
InteractionTests.all
#InteractionTests.incorrectKEGGIdentifiers
#InteractionTests.interactionsWithLabels
#InteractionTests.noGeneProteinConversions
#InteractionTests.noMetaboliteToNonMetaboliteConversions
#InteractionTests.noNonMetaboliteToMetaboliteConversions
#InteractionTests.noProteinProteinConversions
#InteractionTests.nonNumericIDs
#InteractionTests.possibleTranslocations
KEGGMetaboliteTests.all
#KEGGMetaboliteTests.hasCPDprefix
#KEGGMetaboliteTests.noCnumber
#LIPIDMAPSTests.all
#LIPIDMAPSTests.onlyLIPIDMAPS
LIPIDMAPSTests.retiredIdentifiers
#MetaboliteStructureTests.all
#MetaboliteStructureTests.atLeastFifteenMetabolites
MetaboliteStructureTests.isPartOfAPathway
#MetabolitesTests.all
MetabolitesTests.ChEBIIDsNotMarkedAsMetabolite
MetabolitesTests.HMDBIDsNotMarkedAsMetabolite
MetabolitesTests.KEGGIDsNotMarkedAsMetabolite
MetabolitesTests.PubChemIDsNotMarkedAsMetabolite
MetabolitesTests.PubChemIDsNotNumbers
MetabolitesTests.PubChemSubstanceIDsNotMarkedAsMetabolite
MetabolitesTests.PubChemSubstanceIDsNotNumbers
MetabolitesTests.casNumbersNotMarkedAsMetabolite
MetabolitesTests.chemspiderIDsNotMarkedAsMetabolite
MetabolitesTests.metaboliteAlsoOtherType
MetabolitesTests.metabolitesWithAnEnsembleID
MetabolitesTests.metabolitesWithAnEntrezGeneID
MetabolitesTests.metabolitesWithDbButNoIdentifier
MetabolitesTests.metabolitesWithIdentifierButNoDb
#MetabolitesTests.tooManyInChIKeys
#OutdatedDataSourcesTests.all
OutdatedDataSourcesTests.discontinuedUniGene
#OutdatedDataSourcesTests.gpml2021transition
OutdatedDataSourcesTests.noInChIDataSourceYet
OutdatedDataSourcesTests.oldUniprotSwissProt
#OutdatedDataSourcesTests.outdatedChemSpiderDataSource
#OutdatedDataSourcesTests.outdatedECNumberDataSource
#OutdatedDataSourcesTests.outdatedEnsemblCapsSource
#OutdatedDataSourcesTests.outdatedEnsemblChickenDataSource
#OutdatedDataSourcesTests.outdatedEnsemblCowDataSource
#OutdatedDataSourcesTests.outdatedEnsemblHumanDataSource
#OutdatedDataSourcesTests.outdatedEnsemblHumanDataSourceFromGPML
#OutdatedDataSourcesTests.outdatedEnsemblMouseDataSource
#OutdatedDataSourcesTests.outdatedEnsemblMouseDataSourceFromGPML
#OutdatedDataSourcesTests.outdatedEnsemblYeastDataSource
#OutdatedDataSourcesTests.outdatedKeggCompoundDataSource
#OutdatedDataSourcesTests.outdatedKeggCompoundDataSource2
#OutdatedDataSourcesTests.outdatedKeggEnzymeDataSource
#OutdatedDataSourcesTests.outdatedKeggOrthologDataSource
OutdatedDataSourcesTests.outdatedUniprot
OutdatedDataSourcesTests.outdatedUniprot2
OutdatedDataSourcesTests.outdatedUniprot3
OutdatedDataSourcesTests.outdatedUniprot4
OutdatedDataSourcesTests.wrongPubChem
OutdatedDataSourcesTests.wrongWikipathwaysSpelling
PathwayTests.all
#PathwayTests.deletedPathways
#PathwayTests.linksToDeletedPathways
#PathwayTests.linksToDeletedPathways_All
#PathwayTests.oldLicenses
#PathwayTests.speciesMismatch
#PathwayTests.testRoundedRectangle
#PathwayTests.youMustCite
ProteinsTests.all
#ProteinsTests.wrongBrendaFormat
#ProteinsTests.wrongEnzymeNomenclatureFormat
PubChemMetabolitesTests.all
#PubChemMetabolitesTests.nonExistingIdentifiers
#PubChemMetabolitesTests.nonLive2LiveIdentifiers
#PubChemMetabolitesTests.nonNumericIDs
ReferencesTests.all
#ReferencesTests.atLeastOneReference
#ReferencesTests.citesRetractedArticle
#ReferencesTests.nonNumericPubMedIDs
#ReferencesTests.outdatedPubMedIdentifiers
#ReferencesTests.unexpectedPubMedIdentifier
#ReferencesTests.zeroPubMedIDs
UniProtTests.all
#UniProtTests.allP62805
#UniProtTests.deletedIdentifiers
#UniProtTests.incorrectIdentifiers
#UniProtTests.outdatedIdentifiers
#UniProtTests.unreviewedIdentifiers
WikidataTests.all
#WikidataTests.casWithoutMapping
#WikidataTests.chebiWithoutMapping
#WikidataTests.chebiWithoutMapping_Reactome
#WikidataTests.chemspiderCIDWithoutMapping
#WikidataTests.duplicateWikidataMappings
#WikidataTests.hmdbWithoutMapping
#WikidataTests.inchikeyWithoutMapping
#WikidataTests.kNApSAcKWithoutMapping
#WikidataTests.keggWithoutMapping
#WikidataTests.lipidMapsWithoutMapping
#WikidataTests.noWikidataForGenes
#WikidataTests.pubchemCIDWithoutMapping
#WikidataTests.replaceWikipedia
#WikidataTests.retiredIdentifiers
#WikidataTests.wikDataTypo
#WikidataTests.wikidataIdentifiersWrong