diff --git a/bnd/pipeline/pyaldata.py b/bnd/pipeline/pyaldata.py index 56a3a7e..7f271b3 100644 --- a/bnd/pipeline/pyaldata.py +++ b/bnd/pipeline/pyaldata.py @@ -12,8 +12,8 @@ from pynwb.behavior import SpatialSeries from pynwb.misc import Units -from ..logger import set_logging from ..config import _load_config +from ..logger import set_logging from ..pipeline.nwb import run_nwb_conversion logger = set_logging(__name__) @@ -212,7 +212,7 @@ def _parse_pynwb_probe( brain_area_spikes_and_chan_best[brain_area.replace("-", "_")][ "unit_guide" ] = unit_guide - brain_area_spikes_and_chan_best[brain_area.replace("-", "_")]["KSLabel"] = ( + brain_area_spikes_and_chan_best[brain_area.replace("-", "_")]["kslabel"] = ( probe_units.KSLabel[brain_area_neurons][sorted_chan_best_indices] ) @@ -662,8 +662,8 @@ def add_spiking_data_to_df(self): ] * len(self.pyaldata_df) # Add kilosort labels - self.pyaldata_df[f"{brain_area_key}_KSLabel"] = [ - brain_area_spike_data["KSLabel"] + self.pyaldata_df[f"{brain_area_key}_kslabel"] = [ + brain_area_spike_data["kslabel"] ] * len(self.pyaldata_df) self.pyaldata_df[f"{brain_area_key}_spikes"] = np.nan