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Merge pull request #570 from AllenInstitute/rc/0.16.2
Release 0.16.2
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CHANGELOG.md

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# Change Log
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All notable changes to this project will be documented in this file.
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## [0.16.2] = 2019-4-23
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### Added
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- https://github.com/AllenInstitute/AllenSDK/issues/549 Transforms for tissuecyte registration accessible from allensdk
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- https://github.com/AllenInstitute/AllenSDK/pull/568 Release instructions for future maintainers.
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### Changed
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- https://github.com/AllenInstitute/AllenSDK/issues/582 Documentation builds from a yml config in python 3.7
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### Bug Fixes
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- https://github.com/AllenInstitute/AllenSDK/issues/523 pip no longer fails on new conda environment because of tables
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## [0.16.1] = 2019-3-12
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### Added

allensdk/__init__.py

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#
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import logging
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__version__ = '0.16.1'
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__version__ = '0.16.2'
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try:
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from logging import NullHandler

doc_template/index.rst

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See the `mouse connectivity section <connectivity.html>`_ for more details.
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What's New - Release 0.16.1 (March 12th, 2019)
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What's New - Release 0.16.2 (April 23, 2019)
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-----------------------------------------------
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The 0.16.1 release fixes several user-discovered bugs, and updates the versons of several dependencies:
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The 0.16.2 release stabilizes the dependency issues introduced by tables
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* `#207 <https://github.com/AllenInstitute/AllenSDK/issues/207>`_ Fix two missing ephys features (tau and max_euclidean_distance)
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* `#256 <https://github.com/AllenInstitute/AllenSDK/issues/256>`_ Making sure our examples are python3 compatible
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* `#267 <https://github.com/AllenInstitute/AllenSDK/issues/267>`_ Fix a bug in get_cell_specimens filter argument
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* `#295 <https://github.com/AllenInstitute/AllenSDK/issues/295>`_ BiophysicalApi.get_neuronal_models doesn't find perisomatic models
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* `#426 <https://github.com/AllenInstitute/AllenSDK/issues/426>`_ numpy and pytables versions pinned until pytables 3.5 can be pip installed
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* `#523 <https://github.com/AllenInstitute/AllenSDK/issues/523>`_ pip no longer fails on new conda environment because of tables
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Additionally, serveral dependencies were upgraded to resolve installation issues:
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We also now provide access support for the deformable and affine transformations computed by the TissueCyte registration code:
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* numpy==1.15.4
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* numpy==3.4.4
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* pytest>=4.1.1
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* pip install Pillow (Needed in CI infrastructure)
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* For python 2.7 conda install -c conda-forge scikit-image (Needed in CI infrastructure)
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We also removed deprecated functionality in BrainObservatoryNwbDataSet, `and wrote some additional tools for working with itksnap label descriptions <https://github.com/AllenInstitute/AllenSDK/issues/312>`_.
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* `#549 <https://github.com/AllenInstitute/AllenSDK/issues/549>`_ Transforms for tissuecyte registration accessible from allensdk
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Previous Release Notes
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----------------------
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* `0.16.1 <https://github.com/AllenInstitute/AllenSDK/wiki/Release-Notes-(0.16.1)>`_
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* `0.16.0 <https://github.com/AllenInstitute/AllenSDK/wiki/Release-Notes-(0.16.0)>`_
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* `0.14.5 <https://github.com/AllenInstitute/AllenSDK/wiki/Release-Notes-(0.14.5)>`_
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* `0.14.4 <https://github.com/AllenInstitute/AllenSDK/wiki/Release-Notes-(0.14.4)>`_

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