diff --git a/poetry.lock b/poetry.lock index 6288d528..f9b59b93 100644 --- a/poetry.lock +++ b/poetry.lock @@ -8,7 +8,7 @@ python-versions = "*" [[package]] name = "atomicwrites" -version = "1.4.0" +version = "1.4.1" description = "Atomic file writes." category = "dev" optional = false @@ -16,25 +16,25 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "attrs" -version = "21.4.0" +version = "22.1.0" description = "Classes Without Boilerplate" category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" +python-versions = ">=3.5" [package.extras] -dev = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "furo", "sphinx", "sphinx-notfound-page", "pre-commit", "cloudpickle"] -docs = ["furo", "sphinx", "zope.interface", "sphinx-notfound-page"] -tests = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "zope.interface", "cloudpickle"] -tests_no_zope = ["coverage[toml] (>=5.0.2)", "hypothesis", "pympler", "pytest (>=4.3.0)", "six", "mypy", "pytest-mypy-plugins", "cloudpickle"] +tests_no_zope = ["cloudpickle", "pytest-mypy-plugins", "mypy (>=0.900,!=0.940)", "pytest (>=4.3.0)", "pympler", "hypothesis", "coverage[toml] (>=5.0.2)"] +tests = ["cloudpickle", "zope.interface", "pytest-mypy-plugins", "mypy (>=0.900,!=0.940)", "pytest (>=4.3.0)", "pympler", "hypothesis", "coverage[toml] (>=5.0.2)"] +docs = ["sphinx-notfound-page", "zope.interface", "sphinx", "furo"] +dev = ["cloudpickle", "pre-commit", "sphinx-notfound-page", "sphinx", "furo", "zope.interface", "pytest-mypy-plugins", "mypy (>=0.900,!=0.940)", "pytest (>=4.3.0)", "pympler", "hypothesis", "coverage[toml] (>=5.0.2)"] [[package]] name = "babel" -version = "2.9.1" +version = "2.10.3" description = "Internationalization utilities" category = "dev" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" +python-versions = ">=3.6" [package.dependencies] pytz = ">=2015.7" @@ -49,51 +49,51 @@ python-versions = "*" [[package]] name = "boto3" -version = "1.21.16" +version = "1.24.50" description = "The AWS SDK for Python" category = "main" optional = false -python-versions = ">= 3.6" +python-versions = ">= 3.7" [package.dependencies] -botocore = ">=1.24.16,<1.25.0" -jmespath = ">=0.7.1,<1.0.0" -s3transfer = ">=0.5.0,<0.6.0" +botocore = ">=1.27.50,<1.28.0" +jmespath = ">=0.7.1,<2.0.0" +s3transfer = ">=0.6.0,<0.7.0" [package.extras] crt = ["botocore[crt] (>=1.21.0,<2.0a0)"] [[package]] name = "botocore" -version = "1.24.16" +version = "1.27.50" description = "Low-level, data-driven core of boto 3." category = "main" optional = false -python-versions = ">= 3.6" +python-versions = ">= 3.7" [package.dependencies] -jmespath = ">=0.7.1,<1.0.0" +jmespath = ">=0.7.1,<2.0.0" python-dateutil = ">=2.1,<3.0.0" urllib3 = ">=1.25.4,<1.27" [package.extras] -crt = ["awscrt (==0.12.5)"] +crt = ["awscrt (==0.13.8)"] [[package]] name = "certifi" -version = "2021.10.8" +version = "2022.6.15" description = "Python package for providing Mozilla's CA Bundle." category = "main" optional = false -python-versions = "*" +python-versions = ">=3.6" [[package]] name = "charset-normalizer" -version = "2.0.12" +version = "2.1.0" description = "The Real First Universal Charset Detector. Open, modern and actively maintained alternative to Chardet." category = "main" optional = false -python-versions = ">=3.5.0" +python-versions = ">=3.6.0" [package.extras] unicode_backport = ["unicodedata2"] @@ -108,7 +108,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "colorama" -version = "0.4.4" +version = "0.4.5" description = "Cross-platform colored terminal text." category = "dev" optional = false @@ -116,14 +116,14 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*" [[package]] name = "coverage" -version = "6.3.2" +version = "6.4.3" description = "Code coverage measurement for Python" category = "dev" optional = false python-versions = ">=3.7" [package.dependencies] -tomli = {version = "*", optional = true, markers = "extra == \"toml\""} +tomli = {version = "*", optional = true, markers = "python_full_version <= \"3.11.0a6\" and extra == \"toml\""} [package.extras] toml = ["tomli"] @@ -160,7 +160,7 @@ python-versions = ">=3.5" [[package]] name = "imagesize" -version = "1.3.0" +version = "1.4.1" description = "Getting image size from png/jpeg/jpeg2000/gif file" category = "dev" optional = false @@ -168,7 +168,7 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "importlib-metadata" -version = "4.11.2" +version = "4.12.0" description = "Read metadata from Python packages" category = "dev" optional = false @@ -179,9 +179,9 @@ typing-extensions = {version = ">=3.6.4", markers = "python_version < \"3.8\""} zipp = ">=0.5" [package.extras] -docs = ["sphinx", "jaraco.packaging (>=9)", "rst.linker (>=1.9)"] +testing = ["importlib-resources (>=1.3)", "pytest-mypy (>=0.9.1)", "pytest-black (>=0.3.7)", "pytest-perf (>=0.9.2)", "flufl.flake8", "pyfakefs", "packaging", "pytest-enabler (>=1.3)", "pytest-cov", "pytest-flake8", "pytest-checkdocs (>=2.4)", "pytest (>=6)"] perf = ["ipython"] -testing = ["pytest (>=6)", "pytest-checkdocs (>=2.4)", "pytest-flake8", "pytest-cov", "pytest-enabler (>=1.0.1)", "packaging", "pyfakefs", "flufl.flake8", "pytest-perf (>=0.9.2)", "pytest-black (>=0.3.7)", "pytest-mypy (>=0.9.1)", "importlib-resources (>=1.3)"] +docs = ["rst.linker (>=1.9)", "jaraco.packaging (>=9)", "sphinx"] [[package]] name = "iniconfig" @@ -201,11 +201,11 @@ python-versions = "*" [[package]] name = "jinja2" -version = "3.0.3" +version = "3.1.2" description = "A very fast and expressive template engine." category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.7" [package.dependencies] MarkupSafe = ">=2.0" @@ -215,15 +215,15 @@ i18n = ["Babel (>=2.7)"] [[package]] name = "jmespath" -version = "0.10.0" +version = "1.0.1" description = "JSON Matching Expressions" category = "main" optional = false -python-versions = ">=2.6, !=3.0.*, !=3.1.*, !=3.2.*" +python-versions = ">=3.7" [[package]] name = "markupsafe" -version = "2.1.0" +version = "2.1.1" description = "Safely add untrusted strings to HTML/XML markup." category = "dev" optional = false @@ -273,8 +273,8 @@ python-versions = ">=3.6" importlib-metadata = {version = ">=0.12", markers = "python_version < \"3.8\""} [package.extras] -dev = ["pre-commit", "tox"] -testing = ["pytest", "pytest-benchmark"] +testing = ["pytest-benchmark", "pytest"] +dev = ["tox", "pre-commit"] [[package]] name = "py" @@ -302,19 +302,19 @@ python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*" [[package]] name = "pygments" -version = "2.11.2" +version = "2.12.0" description = "Pygments is a syntax highlighting package written in Python." category = "dev" optional = false -python-versions = ">=3.5" +python-versions = ">=3.6" [[package]] name = "pyparsing" -version = "3.0.7" -description = "Python parsing module" +version = "3.0.9" +description = "pyparsing module - Classes and methods to define and execute parsing grammars" category = "dev" optional = false -python-versions = ">=3.6" +python-versions = ">=3.6.8" [package.extras] diagrams = ["jinja2", "railroad-diagrams"] @@ -354,7 +354,7 @@ coverage = {version = ">=5.2.1", extras = ["toml"]} pytest = ">=4.6" [package.extras] -testing = ["fields", "hunter", "process-tests", "six", "pytest-xdist", "virtualenv"] +testing = ["virtualenv", "pytest-xdist", "six", "process-tests", "hunter", "fields"] [[package]] name = "pytest-mock" @@ -408,7 +408,7 @@ docutils = ">=0.14" [[package]] name = "pytz" -version = "2021.3" +version = "2022.1" description = "World timezone definitions, modern and historical" category = "dev" optional = false @@ -416,29 +416,29 @@ python-versions = "*" [[package]] name = "requests" -version = "2.27.1" +version = "2.28.1" description = "Python HTTP for Humans." category = "main" optional = false -python-versions = ">=2.7, !=3.0.*, !=3.1.*, !=3.2.*, !=3.3.*, !=3.4.*, !=3.5.*" +python-versions = ">=3.7, <4" [package.dependencies] certifi = ">=2017.4.17" -charset-normalizer = {version = ">=2.0.0,<2.1.0", markers = "python_version >= \"3\""} -idna = {version = 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+lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-devhelp" @@ -541,8 +541,8 @@ optional = false python-versions = ">=3.5" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] +lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-htmlhelp" @@ -553,8 +553,8 @@ optional = false python-versions = ">=3.6" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] -test = ["pytest", "html5lib"] +test = ["html5lib", "pytest"] +lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = "sphinxcontrib-jsmath" @@ -565,7 +565,7 @@ optional = false python-versions = ">=3.5" [package.extras] -test = ["pytest", "flake8", "mypy"] +test = ["mypy", "flake8", "pytest"] [[package]] name = "sphinxcontrib-qthelp" @@ -576,8 +576,8 @@ optional = false python-versions = ">=3.5" [package.extras] -lint = ["flake8", "mypy", "docutils-stubs"] test = ["pytest"] +lint = ["docutils-stubs", "mypy", "flake8"] [[package]] name = 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Python :: 3', 'Programming Language :: Python :: 3.7', 'Programming Language :: Python :: 3.8', + 'Programming Language :: Python :: 3.9', + 'Programming Language :: Python :: 3.10', ] [tool.poetry.dependencies] -python = ">=3.7,<3.9" +python = ">=3.7,<=3.10" python-lambda-4dn = "0.12.3" boto3 = "^1.9.0" botocore = "^1.12.1" diff --git a/tibanna/lambdas/check_task_awsem.py b/tibanna/lambdas/check_task_awsem.py index 3d4d6ba3..a9f574cf 100755 --- a/tibanna/lambdas/check_task_awsem.py +++ b/tibanna/lambdas/check_task_awsem.py @@ -7,7 +7,7 @@ 'function_handler': 'handler', 'handler': 'service.handler', 'region': AWS_REGION, - 'runtime': 'python3.8', + 'runtime': 'python3.9', 'role': 'tibanna_lambda_init_role', 'description': 'check status of AWSEM run by interegating appropriate files on S3 ', 'timeout': 300, diff --git a/tibanna/lambdas/run_task_awsem.py b/tibanna/lambdas/run_task_awsem.py index 15c4eb64..4b5eda8a 100755 --- a/tibanna/lambdas/run_task_awsem.py +++ b/tibanna/lambdas/run_task_awsem.py @@ -8,7 +8,7 @@ 'function_handler': 'handler', 'handler': 'service.handler', 'region': AWS_REGION, - 'runtime': 'python3.8', + 'runtime': 'python3.9', 'role': 'tibanna_lambda_init_role', 'description': 'launch an ec2 instance', 'timeout': 300, diff --git a/tibanna/lambdas/update_cost_awsem.py b/tibanna/lambdas/update_cost_awsem.py index 42e7e5c2..d0c42e10 100755 --- a/tibanna/lambdas/update_cost_awsem.py +++ b/tibanna/lambdas/update_cost_awsem.py @@ -8,7 +8,7 @@ 'function_handler': 'handler', 'handler': 'service.handler', 'region': AWS_REGION, - 'runtime': 'python3.8', + 'runtime': 'python3.9', 'role': 'tibanna_lambda_init_role', 'description': 'update costs of a workflow run', 'timeout': 300,